| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_0170 |
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| Symbol | |
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| ID | 7090487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | - |
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| Start bp | 171792 |
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| End bp | 173144 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643463504 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002360513 |
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| Protein GI | 217976366 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 0.736393 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGACC GCACCCGGCC GCCGGGCACA GACCCCCTCG ATCCGGTCTA TCTTCGCGAG
GAGGCGAAGG CGCCGAAATC GACTCCTGCG CCGCTGCAGC CGGTCGGCGC GACCGCGCCG
GCCAAGTCGA CGCTGCGGCG GGCGATCCTC ATCGTGCTCG CCGCGCTGAT CGCCTTCGGA
ACCTATCGCT TCATCAAGAT GGACCATTCG AGCGCCACAG GGCCGGCGCC GCAGGCGGCC
CAGGCGCAGC CGGTCGGCGT CGCAACCGTC GCAAAGGGCG ACATCAACAT TCTCGTCAGC
GGGCTTGGGA CGGTGACGCC GCTCGCTAAT GTGACGGTCA AGACGCAGAT CAACGGACAG
TTGATCGACG TCGGCTTCAA AGAAGGCCAG ATGGTCAAGA AAGGCGATTT TCTGGCCCAG
ATCGATCCGC GGCCCTATCA GGTCGCCAAA GAACAATTTG AAGGGCAACG CGACCGCGAC
CAGGGCCTGC TCGATCAGGC GCGCAACAAT ATGCAGCGCT TCCAGACGTT GCTGAAGCAG
GATTCGATCG CCCGCCAAAC CGCCGAGGAC CAGATCTATC TCGTCAAGCA ATATGAGGGG
GCGCTGAAGG CCGATCAGGC CCAGATCGAC GCGCAGACGC TCAATCTCAC CTATGCTCGC
ATCGTGTCGC CACTCGACGG CCGCGTCGGC CTGCGCCTTG TCGATCCCGG CAATTACGTG
CAGACCAGCG ATACCGGCAT CGCGGTCATC ACCCAGCTGC ACCCGATCTC CGTGATCTTC
ACCGTGCCGG AGGATGAGCT TCAGGCCATC CTGGACCGGA TGAACACGGG CGCCGAACTG
CCGGTGTCTA TCTTCGACCG CGCCTATGTG AACAAGCTTG CAACCGGCAA GCTTTCGAAT
GTCGACAATC AGATCGACGC CACGACGGGC ACCATCAAGA TCCGCGCCGA ATTCGACAAT
CTCGATGACA AGCTGTTTCC GAACCAATTC GTCAACGCGC AGCTTCTGAT CGACACCTTG
CGCGGCGCCG TAACGGCTCC GGTGACGGCG ATCCAGCGCG GCGCGCCGGG AACCTATGTC
TACCTCGTCG GAGCGGACGA CAAGGTCGTC ATGCGCAAGG TGACGCTCGG CCCGCAGGAA
GGCGGCCGCG TCGCCATAAC CGCCGGGCTG GCGCCGGGCG ACCGCGTCGT CGTCGATGGA
ACCGATAGGC TGCGCGACGG GGCTGAAGTC TCCATTGCGG CCATTGACGG CGTCGCCACC
GACCCCCCGG CGAAAGATCA GGCGGGCGCA ACGCCCGATG GCAAATCGGG ACACGGATCC
AGGCGTCACG GGCAGCAGCC GGGGGCGCAA TGA
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| Protein sequence | MDDRTRPPGT DPLDPVYLRE EAKAPKSTPA PLQPVGATAP AKSTLRRAIL IVLAALIAFG
TYRFIKMDHS SATGPAPQAA QAQPVGVATV AKGDINILVS GLGTVTPLAN VTVKTQINGQ
LIDVGFKEGQ MVKKGDFLAQ IDPRPYQVAK EQFEGQRDRD QGLLDQARNN MQRFQTLLKQ
DSIARQTAED QIYLVKQYEG ALKADQAQID AQTLNLTYAR IVSPLDGRVG LRLVDPGNYV
QTSDTGIAVI TQLHPISVIF TVPEDELQAI LDRMNTGAEL PVSIFDRAYV NKLATGKLSN
VDNQIDATTG TIKIRAEFDN LDDKLFPNQF VNAQLLIDTL RGAVTAPVTA IQRGAPGTYV
YLVGADDKVV MRKVTLGPQE GGRVAITAGL APGDRVVVDG TDRLRDGAEV SIAAIDGVAT
DPPAKDQAGA TPDGKSGHGS RRHGQQPGAQ
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