| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_0162 |
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| Symbol | |
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| ID | 7090479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | + |
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| Start bp | 158598 |
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| End bp | 160214 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643463496 |
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| Product | hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit |
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| Protein accession | YP_002360505 |
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| Protein GI | 217976358 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain
[COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
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| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTTCC AATATCATTC GCCTTTTCCT CTCGGCAAGG ACAAGACGCC TTTTCGCAAG
ATCGAATGCG GCGGGGTGCG GGTGGAGAAC TTTGGATCGC GCGAATTCCT GGTCGTCGAC
CGCGAAGCCA TCCGCGCGCT GTCCGAGGCG GCGATGATCG ATATCAACCA TCTCCTTCGT
CCGGCCCATC TGGCGCAACT CGTCAAAATT CTCGACGATC CGGAGGCGAG TTCGAACGAC
AAATTCGTCG CCTATGATCT TTTGAAGAAC GCCAATATCG CCGCCGGCGG CGTGCTGCCG
ATGTGTCAGG ACACCGGCAC TGCGATCGTC ATGGGCAAGA AGGGGCGGCT GGTGTTCACC
GAGGGCGATG ACGCCAGCGC GATCGCCGAA GGCGTCAGGG ACGCCTATGA AAAGAAAAAT
CTGCGCTATT CGCAGCTCGC GCCGCTGACC ATGTTCGACG AGGTCAACAC GAAAAACAAT
CTGCCGGCGC AGATCGAGAT CTACGCCGAA GGGGAGGACG CCTATAAATT CCTTTTCGTC
GCCAAGGGCG GCGGCTCCGC CAACAAGACC TTTCTGTTCC AGGGCACGCC CTCGCTGCTG
ACGCGCGACC GCCTGCTCGA TTTTCTGCAT GAGAAAATCC TGACGCTCGG CACCGCCGCC
TGTCCGCCCT ATCACCTCGC CATCGTCATC GGCGGCGCCT CCGCCGAGCT CAATCTCAAG
ACGGTCAAAC TCGCCTCGAC CCATTATCTC GACCAGCTTC CGACCCAGGG CGGCGAGGAC
GGCCACGCCT TCCGCGATCT CGAAATGGAG GCGGAAATCC TGAAAATGAC GCAGCAATCG
GGCGTCGGGG CGCAGTTCGG CGGCAAATAT TTCTGCCATG ACGTGCGGGT CGTGCGGCTG
CCGCGGCACG GCGCGTCGCT GCCGATCGGC CTTGGCGTGT CCTGCTCGGC GGACCGGCAG
GCGCTCGGCG AGATCAACCG CGACGGCGTC TTTCTGGAGG AGCTCGAACA TGATCCGGCG
CGCTTCCTGC CGGCGATCGA TGAAGCGTCG TTGGGCGGCG ACGTCGTCAA GATCGACCTC
ACCCGGCCGA TGCCGGAAAT TTTGGCCGAA CTCACCAAAT ATCCGATCAA GACGCGCCTT
TCGCTGACGG GGCCGATGAT CGTTGCGCGC GATCTCGCCC ATGCCAAGCT CCGCGAGCGG
CTCGAGGGCG GCGAGAGCCT GCCGGATTAT TTCAAGAATC ATCCCGTCTA TTACGCCGGC
CCCGCCAAGA CGCCGCAGGG GTTTGCCTCC GGCTCCTTTG GCCCGACGAC GGCGGGACGC
ATGGATTCCT ATGTCGAGCA GTTCCAGGGC GCTGGCGGCT CCATGGTGAT GCTCGCCAAG
GGCAATCGCT CGCCGAAAGT GCGCGACGCC TGCGCCAAGC ATGGCGGCTT CTATCTCGGT
TCGGTCGGCG GCGCCGCGGC GCGGTTGGCG CAAGACTGCA TCAAGAAGGT CGAAGTGCTG
GAATATGCCG AACTCGGCAT GGAGGCGGTG TGGCGCATCG AGGTCGAGAA TTTCCCCGCC
TTCATCATTA TCGACGACAA AGGCAATGAT TTCTTCAAAG AGCTGAATCT GGGGTGA
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| Protein sequence | MTFQYHSPFP LGKDKTPFRK IECGGVRVEN FGSREFLVVD REAIRALSEA AMIDINHLLR
PAHLAQLVKI LDDPEASSND KFVAYDLLKN ANIAAGGVLP MCQDTGTAIV MGKKGRLVFT
EGDDASAIAE GVRDAYEKKN LRYSQLAPLT MFDEVNTKNN LPAQIEIYAE GEDAYKFLFV
AKGGGSANKT FLFQGTPSLL TRDRLLDFLH EKILTLGTAA CPPYHLAIVI GGASAELNLK
TVKLASTHYL DQLPTQGGED GHAFRDLEME AEILKMTQQS GVGAQFGGKY FCHDVRVVRL
PRHGASLPIG LGVSCSADRQ ALGEINRDGV FLEELEHDPA RFLPAIDEAS LGGDVVKIDL
TRPMPEILAE LTKYPIKTRL SLTGPMIVAR DLAHAKLRER LEGGESLPDY FKNHPVYYAG
PAKTPQGFAS GSFGPTTAGR MDSYVEQFQG AGGSMVMLAK GNRSPKVRDA CAKHGGFYLG
SVGGAAARLA QDCIKKVEVL EYAELGMEAV WRIEVENFPA FIIIDDKGND FFKELNLG
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