| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_0090 |
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| Symbol | |
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| ID | 7090405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | - |
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| Start bp | 81682 |
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| End bp | 82731 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643463422 |
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| Product | pseudouridine synthase, RluA family |
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| Protein accession | YP_002360434 |
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| Protein GI | 217976287 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 0.768556 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGCGTCC AGACATATGA AGTCGCCGAA GATGAGGATG GGCTGCGCCT CGACCGCTGG
TTCAAGCGCC GCATTCCCGC GCTGTCGCTC TCGCATCTAA ACAAGATCGT CCGCACGGGA
CAGGTGCGCG TCGACGGCGC GCGCGTGAAA ACTGCGACGC GGCTGGCGCA GGGCCAGAAC
GTCAGGGTGC CGCCGCTCAA CCTCGAAGCC GCGCCGGAAG CCCCAGTGTT CAGGATTTCC
GAAGAAGATC AGCGCGATCT GCGCCAGATG ATCCTGTTCG AGGACAAGGA TCTCATGGTC
CTCAACAAGC CCTATGGCCT CGCCGTGCAG GGCGGCTCCG GCATGCGCCG CCACATCGAC
GGCATGCTCG CCTCCCTGCC CAACGAGCGC GGCGACCGGC CGGTTCTGGT GCATCGGCTC
GATCGCGACA CCTCCGGCGT GCTGCTGATC GCCAAGACGC GCAAAATGGC CGCCGACCTT
GGCGAAATTT TCCGCTCGCG GCAGGCGCAG AAAATCTATT GGGCTCTGGT CGAGGGCGTG
CCGAAACCGG CGCAGGGCAA AATCTCGCTT TTTCTCGCCA AGGGCGAGGG CATGGATGCG
CGAGGGCCGC GGCGCAGCGA CGAAGAGCGC GCTTCCATGG AAAAGATGCG CGTCGCCAAA
CATGGCGATG AGGACGCGCA GCATTCGGTG ACCTATTACG CCACCGTCGA TACTTTTTCG
CCTCGCGCCG CCTGGCTGTC GATGAAGCCG ATCACCGGCC GGACGCATCA GCTGCGCGCC
CATGCCGAGG CGATCGGCCA TCCGATCATC GGCGATCCCA AATATGGGCT GCGGCCCAAA
ACCGATCCAC GCCGGAACGA TCCGCTGCGC GCCATTCCCG AGACCATCGA GCGCAAGCTG
CATCTGCTGG CGCGCCGCCT GGTGCTGCCG CATCCGCGCG GCGGCGTTTT GGACGTCACC
GCGCCGCTGC CGCCGCATAT GGCGAATTCC TTCGAGACGT TCGGCTTCGA CGTCAAGCAG
TACGACCCGA TCGAGGGCGC GCCGGAATAG
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| Protein sequence | MSVQTYEVAE DEDGLRLDRW FKRRIPALSL SHLNKIVRTG QVRVDGARVK TATRLAQGQN
VRVPPLNLEA APEAPVFRIS EEDQRDLRQM ILFEDKDLMV LNKPYGLAVQ GGSGMRRHID
GMLASLPNER GDRPVLVHRL DRDTSGVLLI AKTRKMAADL GEIFRSRQAQ KIYWALVEGV
PKPAQGKISL FLAKGEGMDA RGPRRSDEER ASMEKMRVAK HGDEDAQHSV TYYATVDTFS
PRAAWLSMKP ITGRTHQLRA HAEAIGHPII GDPKYGLRPK TDPRRNDPLR AIPETIERKL
HLLARRLVLP HPRGGVLDVT APLPPHMANS FETFGFDVKQ YDPIEGAPE
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