Gene Msil_0088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_0088 
Symbol 
ID7090403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp79560 
End bp80435 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content62% 
IMG OID643463421 
ProductBeta-lactamase 
Protein accessionYP_002360433 
Protein GI217976286 
COG category[V] Defense mechanisms 
COG ID[COG2367] Beta-lactamase class A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.748085 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCCC GCCGAGACCT GCTCATCGGC TCGCTATTTG CCGGCGCCGC CCTGTTCGGC 
TTTCGCGCCG CGGCTTTTGA TTTCGATGGC GAGCTGCAAG GGGCTCTTGC CGATCTCGAA
CAAAAGCATG GCGGGCGCCT TGGCGTTGCG ATTCTCGATA CCGCAACGAT GCGGCTGATC
GCACGTCGCG GCGACGAGCG TTTTCCCCTC TGCAGCACGT TCAAGTTTCT TGCCGCCGCC
TTTGTCCTGG CGCGGGTGGA TCGCAAAGAG GAAAGCCTTG CGCGCCGGAT TATCTATGCG
AGCGATGTGC TTGTGGCGCA TTCCCCAATT ACCGGGAAGT ATGTTGGCGG CGATGGTCTG
ACTGTCGGCG AGATCTGCGA GGCCGCGGTG ACCGTCAGCG ACAATACGGC GGGCAATCTG
CTGCTCGACA GTTTTGGCGG ACCGGCCGGA TTGACCGCCT ATGTGCGTTC GCTTGGGGAT
AATTTCACGC GGATCGATCG ACGGGAAACC GAGCTGAACG AAGCCGCGCC CGGCGATCCG
CGCGACACGA CCACCCCGCT TGCGATGCTC GAGATTCTAC ACAAGACCGT TCTGGGGACA
TCGCTATCCG CCCCGTCTCG TCAACAAATG ATCGCGTGGC TCGTCGCCAA TACGACCGGC
GGTCAACGTT TGCGGTCCGG CGCTCCAAAA GGGTGGCGGG TCGGCGACAA GACCGGCTCC
GGCGAGAATA ATACGACGAA TGACATCGCC ATCATCTGGC CGCCTCAGCG CGCGCCACTG
ATCGTGACTG CCTATTACAC GGAAGCTCGC GCATCCGCCG TCGAACGCGA TGCGGTATTG
TCAGAGGTGG GGCGGCTCGC CGCGGATTTG AATTGA
 
Protein sequence
MIARRDLLIG SLFAGAALFG FRAAAFDFDG ELQGALADLE QKHGGRLGVA ILDTATMRLI 
ARRGDERFPL CSTFKFLAAA FVLARVDRKE ESLARRIIYA SDVLVAHSPI TGKYVGGDGL
TVGEICEAAV TVSDNTAGNL LLDSFGGPAG LTAYVRSLGD NFTRIDRRET ELNEAAPGDP
RDTTTPLAML EILHKTVLGT SLSAPSRQQM IAWLVANTTG GQRLRSGAPK GWRVGDKTGS
GENNTTNDIA IIWPPQRAPL IVTAYYTEAR ASAVERDAVL SEVGRLAADL N