| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_0050 |
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| Symbol | |
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| ID | 7090365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | + |
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| Start bp | 46552 |
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| End bp | 47301 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643463383 |
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| Product | type III secretion system inner membrane R protein |
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| Protein accession | YP_002360395 |
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| Protein GI | 217976248 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
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| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGGAT CGAACGCGGT CTTGACTGCC TTCGTTCTTT TTTGCCGCAT CGGCGCCTGC
CTCATGATCA TGCCGGGCAT ATCCAGCGCA CGCATTCCGG TCCGGGTCAG GCTGTTCGTC
GGCTTTGCTA TAACGCTTGG CCTGACGCCA ATCTTGTCGG ACGAGGTTGG TCCAAAAATA
TCGGCTGAAT CGCCTTTTAT CCTGGTCCAA ACCATCCTTA GCGAGAGCTT GATCGGGGGG
CTTATCGGAT TTCTCGGCCG CATTTTTTTC GGGGCCCTCG ACGCCTTGGC GAACGCCATC
GCTATGGCGA TCGGTCTTTC GAGCCCGTTG GCCCCCCCAA CGGACGACAA TGAGCCGGCC
CCGGCAATCG TCTCGCTCAT TTCGCTCGGG GCTCTGGTAT TGTTTTTCCT CACCAATCTG
CACTGGGAGG TTTTGCGCGG ACTGCTTGCG TCCTATTCTG TCTGGCCGGT ATCTGGTCTG
TTCGAAGCGC GCTTGGGGCT TGTTGAAATC GGCAATAGCC TGGCGCGTTC CTTCGCCCTG
GCGCTGCGCG TCAGCAGTCC CTTCATCGTC TACGCGTTGA TCGTCAATCT CGCGATTGGC
ATTGCGTCTC GATTTGCGCC GCAAATTCCA ATCTATTTCA TCACAGTTCC CGCCGTTGCG
GCCGGCGGAT TATTCCTCCT TTACATCACC TGCAGGAGCC TGTTGGAGCT CTTCGTCGCA
GGGTTCTCTC TTTGGCTCGC TTCGGGTTGA
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| Protein sequence | MIGSNAVLTA FVLFCRIGAC LMIMPGISSA RIPVRVRLFV GFAITLGLTP ILSDEVGPKI
SAESPFILVQ TILSESLIGG LIGFLGRIFF GALDALANAI AMAIGLSSPL APPTDDNEPA
PAIVSLISLG ALVLFFLTNL HWEVLRGLLA SYSVWPVSGL FEARLGLVEI GNSLARSFAL
ALRVSSPFIV YALIVNLAIG IASRFAPQIP IYFITVPAVA AGGLFLLYIT CRSLLELFVA
GFSLWLASG
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