| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_0035 |
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| Symbol | fliF |
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| ID | 7092363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | + |
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| Start bp | 30326 |
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| End bp | 31966 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643463368 |
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| Product | flagellar MS-ring protein |
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| Protein accession | YP_002360380 |
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| Protein GI | 217976233 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGGAC AAAAGCAGCT CGAACAGATC TGGGCCAATC TGCTCAAGCT TGGTTCGCGC
CGCCTGATCG CGCTCGCAAT GATCGGCGTC AGCATATTCG CCATGACGGG GCTTGCGGGC
TATTTCCTGT CGAGGCCTGC GCTGGAGACG CTCTACGCGG GTCTCGACAG GCAGGATGTC
AGCCGGATCG GCGCGGCGCT CAAGGAAGCG GACATCGCCT TCGACGTCAA CGCCGAAGGC
AACACCATTC TTGTGCGCTA CGGCGAGACG GCGCGGGCGC GCATGCTGCT CGCGGAAAAG
GGTCTGCCGA ACAGTCCCAA CGCCGGCAAT GAATTGTTTG ACAAGCTGGG CTCGCTCGGC
CTCACCACCT TCATGCAGGA GGTGACGCGC GTGCGCGCGC TCGAGGGGGA GCTCGCCCGC
ACGATCCAGC TGATGCGCGG CGTCAAGGCG GCGCGCGTGC ATGTTGTGAT GCCCGACGAG
GGATCGTTCC GGCGCACCCG CGAGCCGCCA TCGGCGTCCG TGGTGATCCG CACGGAAATG
GCCGACGACG TCGGCGCCGC GAAATCGATC CGCCACCTCG TCGCATCTGC GGTGCCGGGC
ATGACAATGG AGGAAGTGAC CGTTCTCAAT ACGGAAGGGG TGCTTCTTGC ATCCGGCAAC
GATCTTGCCG ATTCGGCGCC GGGCGGAATG TTGACGCTGG AGCGAACCGT CTCGCAGGAA
ATTCTCGACA ATATCCGCAA GACTCTCACT CCCTATCTCG GGCTGCGCAA CTTTCAGGTC
AGCGTCGCGA CGCGTCTCAA TACGGACAAG AAGCAGACCA ACGAGACGAT CTACAACCCG
GATTCGCGCG TCGAGCGGTC CGTCAAGGTG ACGCGGCAGA ACCAGCTCTC GCAAAACAGC
ACGGCGCAAT CGCCAACGAC CGTCGAACGA AATCTGCCGC AGGAAAATGT CAAGGCGGAC
GACGGCAAGC AATCGAACGA GGAGAGCAAG AAGAGCGAAG AGCTGACCAA TTACGAAGTG
TCGTCCAAGA CGATCGCGAC GACGAGCGGC GGCTTCGCCA TCGACAATAT TTCGGTGGCT
GTGTTGATCA ACAGGGCCAG CCTCATGGCC TCGCTCGGCG ACAGGCCCGC GCCCGAAGCG
CTTGGCAAAC AGCTTGGCGA ACTTGAACAA TTGATTGCTT CCGCGGCAGG CGCTCGTAAG
GAGCGCGGCG ACGCCATCAA GATCTCCGCG GTCGATTTCA TCGACGCAGG GCGCGATCTC
GAGCCGCAGC CGCCGCCGCC CGTGTCGGAA CTGCTGATGC GGCAATCCGG CAATGTGCTG
AACGCGGTCA CCATTCTTGT CGTGACTCTG CTCCTCATCT GGTTCGGTTT GCGGCCCGCG
GCCCGCGCTA TTCTTGCGGC CCCGGCTCCG GCGGCGGTCG AAGTTGCGGA GCTTGAGACT
CTTTCCGGCG AAGGGGCTGC TGGGGACGCA AACATGGAAA TCGGCGGCTG GGGACCGCAG
GGGGAAGTTA ATCTCATCGA GGATCTGACC AGCGCGCCGC GGCGATCCCC GCAAAAGAGG
CTCGAGCAGA TTGTCGAATT CGATGAGGAG CAGGCCGCCG CGATCTTGAA GCAATGGATG
AGCCAGGGAG AATATGCGTG A
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| Protein sequence | MIGQKQLEQI WANLLKLGSR RLIALAMIGV SIFAMTGLAG YFLSRPALET LYAGLDRQDV
SRIGAALKEA DIAFDVNAEG NTILVRYGET ARARMLLAEK GLPNSPNAGN ELFDKLGSLG
LTTFMQEVTR VRALEGELAR TIQLMRGVKA ARVHVVMPDE GSFRRTREPP SASVVIRTEM
ADDVGAAKSI RHLVASAVPG MTMEEVTVLN TEGVLLASGN DLADSAPGGM LTLERTVSQE
ILDNIRKTLT PYLGLRNFQV SVATRLNTDK KQTNETIYNP DSRVERSVKV TRQNQLSQNS
TAQSPTTVER NLPQENVKAD DGKQSNEESK KSEELTNYEV SSKTIATTSG GFAIDNISVA
VLINRASLMA SLGDRPAPEA LGKQLGELEQ LIASAAGARK ERGDAIKISA VDFIDAGRDL
EPQPPPPVSE LLMRQSGNVL NAVTILVVTL LLIWFGLRPA ARAILAAPAP AAVEVAELET
LSGEGAAGDA NMEIGGWGPQ GEVNLIEDLT SAPRRSPQKR LEQIVEFDEE QAAAILKQWM
SQGEYA
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