| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_0004 |
|---|
| Symbol | |
|---|
| ID | 7092332 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | - |
|---|
| Start bp | 3086 |
|---|
| End bp | 4144 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643463339 |
|---|
| Product | putative DNA-binding/iron metalloprotein/AP endonuclease |
|---|
| Protein accession | YP_002360351 |
|---|
| Protein GI | 217976204 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0533] Metal-dependent proteases with possible chaperone activity |
|---|
| TIGRFAM ID | [TIGR00329] metallohydrolase, glycoprotease/Kae1 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGTAC TTGGCATTGA AACCACCTGT GACGAGACCG CCGCCGCGGT CGTGCAGCTG
AACCCCGGCG GCGCCGGCGA GATACTCTCC AATGAAGTCA TGAGCCAGAT CGCCGAACAT
GCCGCCTATG GCGGCGTGGT TCCCGAAATC GCCGCGCGCG CCCATATCGA AGTGCTCGAC
CGGCTAGTCG CCCGCGCCCT GGAAGACGCC AAGATCAAGC TCGCCGAGCT CGACGGGATC
GCCGCCGCGG CCGGACCGGG GCTCGTCGGC GGCGTCATCG TTGGCCTCAC CACGGCCAAG
GCGCTGGCTC TGGCGAGCCA CAAGCCCTTT ATCGCCGTCA ATCATCTCGA GGCGCATGCG
TTGACCGCCC GGCTGACCGA CGGCGTCGAC TTCCCCTACC TGCTCCTGCT GGTCTCGGGC
GGCCATACCC AGCTCGTCGC CGTCAAGGGC GTCGGCGACT ATCTGAGGCT CGGCTCGACC
GTCGACGACG CCGTCGGCGA GGCGTTCGAC AAAGTCGCCA AGATGCTTGG CCTCGCCTAT
CCGGGCGGCC CCGAAGTGGA GCGCATGGCG GCCAAGGGCG ATCCAACAAG GTTTGATTTT
CCTCGGCCGA TGCAAGGACG CGCCAAGCCG GATTTTTCTC TCTCGGGCCT CAAGACCGCC
GTCCGGGTGG CGGCGCAGCG CATTCATTCG CCGAGCCAGA CGGATGTCGC CGATCTTTGC
GCCTCGTTTC AGGCGGCGAT CGTCGACACG ATGATCGACC GCTCGCGCGC AGGCTTGCGG
CTGTTTCGCG AGCGCGTTGG CGACTGCAAC GCAATGGTTG TCGCTGGCGG AGTCGGCGCC
AATGGCGCGA TCCGTCGCGC CTTGAGCCGA TTTTGCGCCG AAAGCGGGCT GCGGCTCATT
TTGCCGCCGC CGCAGCTTTG CACCGACAAT GGCGCGATGA TCGCCTGGGC TGGGATCGAG
CGGCTGTCGC TCGGCCTCGT CGACGATATG ACTTTCGCCG CGCGGCCGCG CTGGCCGCTC
GACTCCAACG CCGAAGCCGC ACATCACGGC AAGGCTTAA
|
|---|
| Protein sequence | MRVLGIETTC DETAAAVVQL NPGGAGEILS NEVMSQIAEH AAYGGVVPEI AARAHIEVLD
RLVARALEDA KIKLAELDGI AAAAGPGLVG GVIVGLTTAK ALALASHKPF IAVNHLEAHA
LTARLTDGVD FPYLLLLVSG GHTQLVAVKG VGDYLRLGST VDDAVGEAFD KVAKMLGLAY
PGGPEVERMA AKGDPTRFDF PRPMQGRAKP DFSLSGLKTA VRVAAQRIHS PSQTDVADLC
ASFQAAIVDT MIDRSRAGLR LFRERVGDCN AMVVAGGVGA NGAIRRALSR FCAESGLRLI
LPPPQLCTDN GAMIAWAGIE RLSLGLVDDM TFAARPRWPL DSNAEAAHHG KA
|
|---|
| |