| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_4398 |
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| Symbol | |
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| ID | 7090185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011664 |
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| Strand | - |
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| Start bp | 73022 |
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| End bp | 74377 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 643463268 |
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| Product | integrase family protein |
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| Protein accession | YP_002360280 |
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| Protein GI | 217975610 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.0364227 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.00879025 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAACAG TGAAATTAAC ACAAGTGTTT ATTCGGTCAT TAGCCCGTCA AACACGCGCC
TATATCATTC AAGACAGTCT CTGTCATGGC CTTGGCGTTA AAGTGATGCC CGATAAACCG
ATGCAGTACG TTATTAGCCG CCTTATTGAT AATCGGACAC GCACACGCAT TCTTGCGCCT
GTTAGTGCGC TAACGGTTAA AGCGGCACGG GAGAAGGCAA CAGGGCAACT TCAAGCATGG
CGAGAGGAGC ACACTCAACC GAGCATGAGT GCTTCACCTC GTTTTGACGT GTTTGTTGAA
CAAACATGGA AGCCGATGAT TTTTGAACAC TGGAAACCCA GTACAAAACG GTCAGTCTTG
CCTGCGCTGA ATAGACGCTT GTTAGCTCAT TTTGGCCGTT ACCCGTTGCA CATGATTAAC
CATAAGATGG TGCAAGCATG GTTTGATGAG ATAAGTAAAA CGCGCAAAGG TGCCGCTAAC
CGTAACCTTG ATACATTACA ATCCGTCTTC AAGTTAGCAT TGAGGCAGGG GCATTGCCTG
ACGAATCCCT GTATTGGTAT TCGGCAAAAC AAAAGGCGGG TATTAAATCG CTTTTTGAGT
GTTGCTGAAA TGCAGCGTTT ATCTGTGGCG CTTGATGAAT GTGAAAAGGT CGGCGGCAGT
ATTGCTCAAT GTGCTGATAT TTTGCGGCTT TTACTGCTCA CAGGCTGCCG ATTATCGGAA
ATCACCTTTT TAAAAGGGGA GTACGTTCGC GGCAATGAAT TGCATTTACC CGACAGTAAA
ACGGGGGCAA AAGTGCTTTA CATTGGTCAA GCCGCAGTTG ACATATTAAG TCGCTATCAC
TGTAAGGCCA ATACAGAACT TTTTCCGATG AAACAGGGCG CTTCCACTTC ATTGGTACAG
TCGCTATGGC TAAGGTTGCG AAAACAGATA GGGATTGAAG ATGTGAGATT GCATGATTTA
AGGCATACCT TTGCAAGTTA TGCCGTCATG GACGGATGCA GTATTCCGAT GGTGGCCTCT
TTACTGGGGC ATAAAAAAGT CACTATGACG TTACGATATA CCCATGTTGG GGATGATAGC
GTAGAGCAAG CCGCTGAGAT TATTGGGGCT GTCTTCAAAG GCATTTTTAC TCAGTCTGAA
CCCCTTAAAC CCTTAATACC TCAAACTAAT GAGGCTCCAA CGCTAGCCGT AAAAGTAAAG
CAAAAGCGTC TGCCAGAAAG AAAACCAACA GCGAAGCCAA AGCCTAAAGC GGTGAAGAAA
GTGAAGCAGG TTAAACCATT ACAGACACCG GCCTCTTTAA CGAAAGAGGA GAGCCGCGCG
ATACAACGAT TTAGGGATCG TGAACTATTC TTGTAA
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| Protein sequence | MKTVKLTQVF IRSLARQTRA YIIQDSLCHG LGVKVMPDKP MQYVISRLID NRTRTRILAP
VSALTVKAAR EKATGQLQAW REEHTQPSMS ASPRFDVFVE QTWKPMIFEH WKPSTKRSVL
PALNRRLLAH FGRYPLHMIN HKMVQAWFDE ISKTRKGAAN RNLDTLQSVF KLALRQGHCL
TNPCIGIRQN KRRVLNRFLS VAEMQRLSVA LDECEKVGGS IAQCADILRL LLLTGCRLSE
ITFLKGEYVR GNELHLPDSK TGAKVLYIGQ AAVDILSRYH CKANTELFPM KQGASTSLVQ
SLWLRLRKQI GIEDVRLHDL RHTFASYAVM DGCSIPMVAS LLGHKKVTMT LRYTHVGDDS
VEQAAEIIGA VFKGIFTQSE PLKPLIPQTN EAPTLAVKVK QKRLPERKPT AKPKPKAVKK
VKQVKPLQTP ASLTKEESRA IQRFRDRELF L
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