| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_4298 |
|---|
| Symbol | |
|---|
| ID | 7089100 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 5107219 |
|---|
| End bp | 5109030 |
|---|
| Gene Length | 1812 bp |
|---|
| Protein Length | 603 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 643463172 |
|---|
| Product | protein of unknown function DUF885 |
|---|
| Protein accession | YP_002360187 |
|---|
| Protein GI | 217975436 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4805] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.000000000426014 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCATAAAC TCTTAACCCC CAGTTTATTG ATATGCGCAT TAAGCGCCTG CAGTGCCACT
CAAACCACAG AAAATAGCCA AACCGCAGCG CCACAGGCAA TATCAGCAAC ACAATCGCAA
GTTGAGCCCA TAGCTCCCGC GCTGCAGGCG ATTATCGACC AAAGCTGGCA ATTACAGCTC
AGCGCGAGTC CTGAAATGGC TTACAGCATG GGCGATGCCA GTGCCGCAGG AAAGTTATCG
GATCTCTCGC CAGCTGCACT CGCTAAGCTC AATCAAGGCC AAATCGCAGT ATTAGCGCAG
CTCAAAGCAC TCGACCGCAG CAGTTTGAAT AAAGAAGATA AGATTAACGC TCAAATACTG
GAAGATCAGG TCCAAAACGA TGTCGACCTG TATCGCTTTA AAGATTATTA CTTGCCCATT
ACCGCGGAAA GCGGCTTCCA CGCTTATATC ACCTCAATCG CACAGGGAAG ATTCAACACC
CTTGAGGATT ACCGCAACTA TATTGCCAAA CTCAATGCAC TCCCGACCTA TTTCGCCCAG
CAAACTCACT GGCTAAAGCA AGGATTAGCC GAGGGAATAA CGCCGCCTAA AGTGACACTC
AATGGCTTTG AAGACAGTAT CAGTGCTTAT ATCGTCCCTG TGGAAAAGAG CGGTTATTTC
AAACCTTTTA CGCAATACCC CAGCTATTTC ACTGAAGCAC AAAAAACTCA GCTGACCCAA
GAAGGTCGCG CCTTAGTCGA GCAAAAAGTC CTACCGCTAT ATCAAAACTT CTATGATTTT
ATGACCAAAG AGTACATTCC CAATGCACGG GAAAATATCG CGGCCAGCAG CTTACCTAAC
GGTGCTGAGT TTTATGAGAA TCGAGTACGT TACTATACGA CCTTGAATAT GACGTCGGCA
GAAGTGCATG AACTGGGCTT AAAAGAAGTA AAGCGTATCC GCCAAGAGAT GGAGCAAATC
ATCAAGTCCG TTGGCTTTAA AGGCAGCTTT GCCGACTTTT TACATTTCCT GCGGACCGAT
CCCCAGTTCT ACACCACAAG TGCCGATCAG TTACTCAAAG AAGCGGCATT TATTGCCAAA
AAAGCCGATG CCATGCTGCC TAAGTACTTC GGCAAACTTC CCCGTAAACC TTATGGCATA
GCGCCAGTGC CCGCCGAAAT TGCGCCGAAA TACACCACAG GACGATATTC AGGATCGAAC
AGCGATGACG AACCCGGTTA CTACTGGGTC AACACTTATG CATTGGATAA GCGCCCACTC
TACGAGTTAG AAGCCTTAAC CTTGCACGAA GCCGTACCCG GTCATCATCT GCAAATTTCA
CTCAACTCTG AGCTAACGTC ACTCCCTGAC TTCCGTCGTT ATGGCTATAT ATCTGCCTTC
GGTGAAGGCT GGGGTCTGTA TTGCGAATAC TTAGGTTTGG AGGCTGGCTT CTACCAAGAT
CCCTACAGTA ACTTTGGCCG CTTAACCTAT GAAATGTGGC GGGCGGCGCG TTTAGTCGTA
GACACAGGCA TGCATGCCCA AGGGTGGAGC CGTCAACAAG CCATCGACTT TATGGCCAGC
AATACCGCGC TATCACTGCA CAATGTCACG ACCGAAATTG ACCGTTATAT TTCGTGGCCA
GGACAAGCTT TGTCCTACAA GATTGGCGAG TTAACGATCA AGCGGTTACG TGCTAAAGCA
GAACAGGAAC TCGGCGACAA GTTTGATATT CGCGCCTTCC ACGACGCTGT GCTCGAAAAT
GGCTCAGTAC CTATGTCGAT CCTCGAACAG CAAATCAATG ATTTTATTGA AGCTAAAAAG
GCGACACGCT AA
|
|---|
| Protein sequence | MHKLLTPSLL ICALSACSAT QTTENSQTAA PQAISATQSQ VEPIAPALQA IIDQSWQLQL
SASPEMAYSM GDASAAGKLS DLSPAALAKL NQGQIAVLAQ LKALDRSSLN KEDKINAQIL
EDQVQNDVDL YRFKDYYLPI TAESGFHAYI TSIAQGRFNT LEDYRNYIAK LNALPTYFAQ
QTHWLKQGLA EGITPPKVTL NGFEDSISAY IVPVEKSGYF KPFTQYPSYF TEAQKTQLTQ
EGRALVEQKV LPLYQNFYDF MTKEYIPNAR ENIAASSLPN GAEFYENRVR YYTTLNMTSA
EVHELGLKEV KRIRQEMEQI IKSVGFKGSF ADFLHFLRTD PQFYTTSADQ LLKEAAFIAK
KADAMLPKYF GKLPRKPYGI APVPAEIAPK YTTGRYSGSN SDDEPGYYWV NTYALDKRPL
YELEALTLHE AVPGHHLQIS LNSELTSLPD FRRYGYISAF GEGWGLYCEY LGLEAGFYQD
PYSNFGRLTY EMWRAARLVV DTGMHAQGWS RQQAIDFMAS NTALSLHNVT TEIDRYISWP
GQALSYKIGE LTIKRLRAKA EQELGDKFDI RAFHDAVLEN GSVPMSILEQ QINDFIEAKK
ATR
|
|---|
| |