Gene Sbal223_4296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_4296 
Symbol 
ID7089098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp5104575 
End bp5105915 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content45% 
IMG OID643463170 
Productcoproporphyrinogen III oxidase 
Protein accessionYP_002360185 
Protein GI217975434 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases 
TIGRFAM ID[TIGR00538] oxygen-independent coproporphyrinogen III oxidase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000258009 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCGAAA AGTATAACTA CAGCGGTCCC CGTTATACCT CTTACCCAAC GGCATTGGAG 
TTCGATGACA CATTCACCGA ACAAAACCTG CTGACGGCCA TTGAAAATAG CAAAAGCGAT
AAACTGTCGC TGTATATTCA TATCCCGTTC TGCGCCAAGC TTTGTTATTA CTGCGGCTGT
AATAAAGTCA TCACCCGCCA CCAACACAAA GCCGATCAGT ACATTGAATA TTTGAGCCAA
GAAATTATCA AACGTGCGCC CCTGTTTAAA CATTACAGTG TGACCCAAAT GCATTGGGGC
GGCGGTACAC CTACGTTCTT AAATCCTGAG CAGATTCTTA AACTTACGTC ATTGATTAAA
GCTAACTTTA ACTTTGCGGA AGAAGGCGAG TACTCAATTG AAGTCGATCC TCGCGAGATA
GAACTGTCAA TGCTCGACAC ATTGAAAGAA GCGGGCTTCA ACCGGATCTC CATCGGCGTA
CAAGATTTCA ATAAAGAAGT GCAAATTGCC GTTAATCGCG AACAAGACGA GCAATTTATC
TTCGACTTGA TGGCCAAAGC GAAAGCCATG GGTTTTGTGT CAACCAACAT AGATTTAATC
TATGGTTTGC CACACCAAAC GCCAGAAACC TTTGCCGTCA CTATGCAGCG CGTTTTAGAT
TTATCGCCTG ATCGCCTGTC GGTATTTAAC TATGCTCACT TACCTGCGCG CTTTGCTGCA
CAACGTAAGA TCAAAGACGA GCATTTACCT TCGCCAAAAC AAAAACTCGA AATGCTGCAC
CAAACTATCG AGACCTTAAC TGGCGCTGGC TACCAATATA TCGGTATGGA CCACTTTGCT
AAACCCGATG ACGAGTTAGC CAAGTTACAG CGCGAAGGCA GACTGCACCG CAACTTCCAA
GGTTATACCA CCCAAGAAGA ATGCGATTTG TTAGGTCTTG GCGTGTCATC CATCAGCCAG
ATTGGCGACT GCTATGCGCA AAACCAGAAA GATATCCGCC CTTACTATGA AGCCATAGAT
AAGGAAGGCC ATGCTTTGTG GAAAGGTTGT AGCCTGAACC GTGACGATGA AATCCGCCGC
GTAGTGATTA AACAGCTGAT TTGCCACTTC GAATTAGATA TGGCGAAAAT TGATGAGAAA
CTGGGGATTA ACTTCGAAAC CTATTTCGCG GAAGATCTTA AGTTAATACA GACATTTATC
GATGACAAGC TAGTTGAAAT CGTCGACAGA CAGATCACTA TCAGCCCAAC TGGCCGTTTA
TTGATCCGCA ATATCTGTAT GTGCTTCGAC CTTTACTATC GTCAAAAAGC GCGTCAGCAA
CAGTTCTCGC GCGTGATCTA A
 
Protein sequence
MIEKYNYSGP RYTSYPTALE FDDTFTEQNL LTAIENSKSD KLSLYIHIPF CAKLCYYCGC 
NKVITRHQHK ADQYIEYLSQ EIIKRAPLFK HYSVTQMHWG GGTPTFLNPE QILKLTSLIK
ANFNFAEEGE YSIEVDPREI ELSMLDTLKE AGFNRISIGV QDFNKEVQIA VNREQDEQFI
FDLMAKAKAM GFVSTNIDLI YGLPHQTPET FAVTMQRVLD LSPDRLSVFN YAHLPARFAA
QRKIKDEHLP SPKQKLEMLH QTIETLTGAG YQYIGMDHFA KPDDELAKLQ REGRLHRNFQ
GYTTQEECDL LGLGVSSISQ IGDCYAQNQK DIRPYYEAID KEGHALWKGC SLNRDDEIRR
VVIKQLICHF ELDMAKIDEK LGINFETYFA EDLKLIQTFI DDKLVEIVDR QITISPTGRL
LIRNICMCFD LYYRQKARQQ QFSRVI