| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_4288 |
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| Symbol | |
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| ID | 7089090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 5094147 |
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| End bp | 5094992 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 643463162 |
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| Product | Rhomboid family protein |
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| Protein accession | YP_002360177 |
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| Protein GI | 217975426 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0527453 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00000054615 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATAGAAA TTGGCCGACT CCCCAACAGT AGAGCCGCGC AGGCATTTGT CGATTACCTC
AAAGGTGAAC ACATTGACTG CCAAATTGAG CCGCTGGAGC AAGGTGTCGC CATTCTCGTC
ATCCATGACA AAGATCTGGA GCAAGCGCGC ACAGAGTTTG CCCATTTCAT GGCTCATCCC
TACGACAGTA AATATCTGCA AGCCTCGTGG GAACACGGCG ATACCCAAAC TAAGATAGAT
TACGGCGCGC CTTCGCTACA GTTGTTTACC CAATTCATTA CCGGCGCAGG CCCAGTCACG
TTGATCGTTT TTGCGGTTTG CGTACTCATT TTTGCGGCGA TGAACTTAGG GTTCGCCAAC
CAAACCTACG CAGCACTGTC CTATTTTGGC GCTGTACCAA ATTCAGAGTT CAGCCAGTTC
TGGCGTGTTT TTACCCCAAG CCTGCTGCAT TTTTCAGCCA TGCACGTCAT CTTTAACTTG
CTCTGGTGGT GGTATTTAGG CGGTAAAATC GAAACCCGAA TCGGCACAGC ACCATTGCTA
ATCTTGCTGT TTGTGGCGGG AACACTGCCA AACGTCATCC AATATTATGT CGGTGGACCT
AACTTCGGCG GGCTATCCGG CGTTGTGTAT GCCGTGGTGG GTTACACTTG GGTCATGGGG
ATACGTAAAC CTGCTGCTGG AATAGACTTT CCACCATCAT ATATGGCCTT TATGATTATT
TGGTTGGCAT TGGGATTCAC GGATATTCTA GGGGTTGCCG TTGCGAACGG TGCCCACATT
GGTGGCTTAC TCATAGGGTT AGCCCAAGGT TTATTCGATA GCCGCAAGTC CTCAAGCTCA
ATCTAA
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| Protein sequence | MIEIGRLPNS RAAQAFVDYL KGEHIDCQIE PLEQGVAILV IHDKDLEQAR TEFAHFMAHP
YDSKYLQASW EHGDTQTKID YGAPSLQLFT QFITGAGPVT LIVFAVCVLI FAAMNLGFAN
QTYAALSYFG AVPNSEFSQF WRVFTPSLLH FSAMHVIFNL LWWWYLGGKI ETRIGTAPLL
ILLFVAGTLP NVIQYYVGGP NFGGLSGVVY AVVGYTWVMG IRKPAAGIDF PPSYMAFMII
WLALGFTDIL GVAVANGAHI GGLLIGLAQG LFDSRKSSSS I
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