| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_4273 |
|---|
| Symbol | |
|---|
| ID | 7089074 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 5077712 |
|---|
| End bp | 5078875 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 643463147 |
|---|
| Product | nucleotide sugar dehydrogenase |
|---|
| Protein accession | YP_002360162 |
|---|
| Protein GI | 217975411 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1004] Predicted UDP-glucose 6-dehydrogenase |
|---|
| TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATTG TTGTTGTTGG GATGGGCTAT GTGGGCCTAT CAAATGCCGT CTTATTGGCG
CAGCAAAACC AAGTCACTGC AATTGATTTA GTTCCTGAAC GTGTCAAGCA AGTTAACGAG
CGTAAATCCA CTGTGGTCGA TGAATTAATC GAAGACTATC TGCAAAACAA ACCGTTGAAT
TTAACTGCAA CAACGGAAAA TGTTGCCTTT CAATCGGCTG ACTTTGTGAT TATTGCGACT
CCAACAGACT ACGATCCTCA GACTAATTAT TTTAATACCC ATTCGGTTGA AAGCGTCATT
CGTGATGTAC TCGCTACTAA TCCTGATACG ACGATTATCA TCAAATCGAC TGTCCCCGTC
GGTTATACAG CAGCATTAAG GCACAAGTTT AAGAGCGACA ACATACTCTT TTCTCCAGAG
TTTTTACGCG AAGGTAAAGC CTTGTATGAC AACCTTTATC CCTCACGGAT TGTAGTCGGT
GAACGCTCGG CGCGTGCCCA AGTCTTTGCA AACCTTTTAG CCAAGGCGGC AATCAAGCAA
GATATTCCTA TTTTGCTGAC CGATAGCACC GAAGCCGAAG CGATTAAGTT ATTTGCTAAT
ACATTTCTCG CCATGCGGGT CGCCTACTTT AACGAGCTCG ATACCTATGC AGAGAGTCGA
GGATTAAATA CTCGCCAGAT TATTGAGGGG GTTAGCCTCG ATCCGCGTAT TGGTGATTAT
TACAACAATC CTTCTTTTGG CTATGGCGGG TACTGTCTTC CGAAAGACAC TAAGCAATTA
CTGGCTAACT ACAATGATGT CCCAAACAAT TTAATCAGTG CCATTGTCGA CTCAAACACC
ACACGCAAAG ACTTTATCGC CGACGCTATT ATCCGTAAGC AGCCAAAATG TGTAGGAATT
TATCGTTTGA TCATGAAAGC CGATTCAGAC AATTTCCGCG CCTCAGCAGT GCAAGGCGTG
ATGAAGCGCA TTAAAGCGAA AGGCATTGAA GTCGTCGTGT TTGAGCCTGT ACTTAAAGAA
GATTACTTTT TCAAATCTCG CGTGATGAGA GACTTAACTG AATTTAAGTC AATGTGTGAT
GTGATCGTCT CCAACCGTAT GGTTGATGAA CTCAATGATG TTGCGGATAA AGTCTATACC
CGAGATCTAT TTCACCATGA TTAA
|
|---|
| Protein sequence | MKIVVVGMGY VGLSNAVLLA QQNQVTAIDL VPERVKQVNE RKSTVVDELI EDYLQNKPLN
LTATTENVAF QSADFVIIAT PTDYDPQTNY FNTHSVESVI RDVLATNPDT TIIIKSTVPV
GYTAALRHKF KSDNILFSPE FLREGKALYD NLYPSRIVVG ERSARAQVFA NLLAKAAIKQ
DIPILLTDST EAEAIKLFAN TFLAMRVAYF NELDTYAESR GLNTRQIIEG VSLDPRIGDY
YNNPSFGYGG YCLPKDTKQL LANYNDVPNN LISAIVDSNT TRKDFIADAI IRKQPKCVGI
YRLIMKADSD NFRASAVQGV MKRIKAKGIE VVVFEPVLKE DYFFKSRVMR DLTEFKSMCD
VIVSNRMVDE LNDVADKVYT RDLFHHD
|
|---|
| |