Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_4217 |
Symbol | |
ID | 7089158 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 5012478 |
End bp | 5014517 |
Gene Length | 2040 bp |
Protein Length | 679 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 643463091 |
Product | Oligopeptidase A |
Protein accession | YP_002360106 |
Protein GI | 217975355 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0339] Zn-dependent oligopeptidases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 89 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCAACC CTTTGCTTAG CGGCGCAAAA TTACCGCTTT TTTCACAGAT TAAACCGGAA CATATTCAAG TCGCCGTTGA GCATGCCATT GCTCAGTGCC GCACTAAGAT TGATCAAGTG CTGCAGAATC AAGGTCCTTA CACTTGGGAC AACTTGGTCG CGCCACTAGA ACAGGTTGAC GATGAACTGA GCCAAATTTG GTCGCCCGTT TCTCACATGA ATTCAGTGAC CAGCACCGAT GAATGGCGCG CTGCTCATGA TGCTTGTTTG CCATTATTGT CGGAATACGG CACCTATGTT GGTCAACACC AAGGTTTGTA TCAAGCCTAT AAAGCCCTGC GTGCATCGAA TGAATTTACA CAATTAAGCC AAGCCCAGCA GAGGGTGATT GAACACAGTC TGCGCGATTT TGAACTATCG GGTATTGGCT TAGATGACGC GCAAAAAGTG CGTTATGGCG AAATGGTAAA ACGTCTTTCT GAACTCACCA GTGGCTTTTC GAATCAATTA CTGGATGCGA CCCAAGCTTG GACTAAGTTA ATCACAGATG AAGCGGAACT TGCTGGCCTG CCAGAGTCAG CCAAAGCCGC CGCTAAGGCG ATGGCCGATG CGCGTGAGTT AGACGGTTGG TTGTTTACCT TAGATTTCCC TTCTTATTTA CCTGTCATGA CTTACAGCGA AAACCGCAGT CTTCGCGAAG AGTGTTACCG CGCTTTCGTT ACGCGCGCCT CGGATCAAGG TCCTAATGCT GGCGAGTTTG ATAACAGCCC GCTGATGGAC GAAATCCTTG CTTTGCGCCA CGAACTCGCA TTGTTACTCG GTTTTGACAG TTTTGCCGAC AAATCCCTAG CGACGAAAAT GGCTGAAACG CCGGCGCAGG TGATGGCATT TTTAAATGAG TTAGCGCTGC GCTCAAAGGA TCAAGCTAAG GCCGAAGTGG CCGAGCTGAG AGCGTTTGCT GAGGCACAAT ACGGCGTGAG CGAAATGGCA TCTTGGGACT TAAGTTTCTA TGCCGAGAAG TTGCAGCAGC ATAAGTATGA GATTTCACAG GAAATCCTGC GTCCTTACTT CCCTGAAGAT AAAGTGCTCT CGGGTTTGTT CTACACAGTC TCGCGTTTGT TCGGCCTTAA AATCGTTGAG CAAAAAGACC TTGATCGTTG GCATAAAGAC GTGCGTTTCT TCGATATTTT CGACGAAACT GACGAACACA GAGGCAGTTT TTACCTCGAC TTATATGCCC GCACAGGTAA ACGTGGCGGG GCTTGGATGG ATGACTGCCG TGTGCGCCGT CAAACCGCCG ATGGATTGCA AAAGCCAGTG GCCTATTTGA CCTGTAACTT TAATGGTCCG GTCGATGGCA AACCTGCGCT ATTCACCCAC GATGAAGTGA CGACCCTGTT CCACGAATTT GGCCATGGTA TCCACCACAT GCTGACCAAA ATCGATGTTG CAGGCGTGTC GGGTATCAAT GGTGTGCCTT GGGATGCGGT CGAGTTACCG AGCCAATTTA TGGAAAACTG GTGCTGGCAG GAAGAAGCCT TAGCCGAAAT TTCAGGTCAC TTCGAAACGG GCGAGCCATT ACCTAAAGCC TTGTTAGATA AGATGCTGGC GGCGAAAAAC TTCCAATCTG GCATGATGAT GCTGCGCCAA CTTGAGTTCT CGCTATTCGA TTTTAGAATG CACCACGAAT ACGACCCCGC TAAAGGCGCG CGCATTCAAG AAACCTTAGA CGAAGTGCGC CGTCAGGTGG CCGTATTAAC GCCGCCAGAC TTTAACCGTT TCCAACATGG TTTTGCCCAC ATTTTTGCGG GCGGTTATGC CGCGGGTTAT TACAGTTATA AATGGGCAGA AGTGCTATCG GCGGATGCGT TTTCCCGCTT CGAAGAGGAA GGGATTTTCA ATCCAGAAAC GGGTCGTCGC TTCCTGCACA ATATCCTCGA AATGGGTGGC TCAGCCGAAC CTATGGACTT GTTCAAACAG TTTATGGGAC GCGAGCCGAA TATCGATGCC CTGTTAAGAC ATTCAGGCAT TGCTGCATAA
|
Protein sequence | MSNPLLSGAK LPLFSQIKPE HIQVAVEHAI AQCRTKIDQV LQNQGPYTWD NLVAPLEQVD DELSQIWSPV SHMNSVTSTD EWRAAHDACL PLLSEYGTYV GQHQGLYQAY KALRASNEFT QLSQAQQRVI EHSLRDFELS GIGLDDAQKV RYGEMVKRLS ELTSGFSNQL LDATQAWTKL ITDEAELAGL PESAKAAAKA MADARELDGW LFTLDFPSYL PVMTYSENRS LREECYRAFV TRASDQGPNA GEFDNSPLMD EILALRHELA LLLGFDSFAD KSLATKMAET PAQVMAFLNE LALRSKDQAK AEVAELRAFA EAQYGVSEMA SWDLSFYAEK LQQHKYEISQ EILRPYFPED KVLSGLFYTV SRLFGLKIVE QKDLDRWHKD VRFFDIFDET DEHRGSFYLD LYARTGKRGG AWMDDCRVRR QTADGLQKPV AYLTCNFNGP VDGKPALFTH DEVTTLFHEF GHGIHHMLTK IDVAGVSGIN GVPWDAVELP SQFMENWCWQ EEALAEISGH FETGEPLPKA LLDKMLAAKN FQSGMMMLRQ LEFSLFDFRM HHEYDPAKGA RIQETLDEVR RQVAVLTPPD FNRFQHGFAH IFAGGYAAGY YSYKWAEVLS ADAFSRFEEE GIFNPETGRR FLHNILEMGG SAEPMDLFKQ FMGREPNIDA LLRHSGIAA
|
| |