Gene Sbal223_4211 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_4211 
Symbol 
ID7089152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp5004126 
End bp5007260 
Gene Length3135 bp 
Protein Length1044 aa 
Translation table11 
GC content50% 
IMG OID643463085 
Producttransporter, hydrophobe/amphiphile efflux-1 (HAE1) family 
Protein accessionYP_002360100 
Protein GI217975349 
COG category[V] Defense mechanisms 
COG ID[COG0841] Cation/multidrug efflux pump 
TIGRFAM ID[TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones95 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGTT TTTTTATTGA TCGCCCCATC TTTGCGTGGG TGATCGCCTT GATTATTATG 
CTGGCGGGGA TCCTCTCGAT CCGCTCGCTG CCAGTGTCTC AATATCCTAA CATTGCACCA
CCCACCGTGG TGATCAGTGC TAACTATCCT GGCGCTTCCG CTAAAATTGT TGAAGATTCT
GTGACTCAGG TGATTGAGCA ACGTATGACG GGTATCGATC ACCTCCGTTA TATCTCCTCA
ACCAGTGACA GTTTTGGTAA TGCGTCTATT ACCTTAACCT TCAACGCCGA AGCCGATCCG
GATATTGCAC AGGTTCAAGT TCAGAACAAG TTACAGGGCG CTATGACCCT GTTACCGCAA
GAAGTGCAGT CGCAAGGGGT TAACGTTAAC AAGTCGAGTT CAGGCTTCTT AATGGTATTA
GGCTTCGTAT CGACCGACGG TTCGTTAGAT AAAGGCGATA TCGCCGACTA CGTTGGTGCG
AACATTCAAG ATCCTATGAG CCGTGTTCCG GGTGTAGGTG AAATTCAGCT GTTCGGTGCC
CAATATGCGA TGCGTATATG GCTAGATCCG TTGAAGTTGA CTCAATATAA CTTAACTAGC
TTAGATGTTA TTGCGGCTAT TCGTTCTCAA AACGCTCAAG TCTCCGCTGG ACAGTTAGGT
GGCGCGCCAT CTGTTGCTGG CCAAGAGCTG AACGCGACGG TATCGGCTCA AAGCCGCTTA
CAAACGGCTG AAGAGTTTCG CAAGATTATC CTTAAATCGG ATATTTCAGG TGCAAATGTC
TTCCTCGGTG ATGTGGCGCG AGTTGAGTTA GGTTCTGAAA GTTATGCCGT GGTGTCACTG
TATAATGGTC AACCTGCAAC AGGGTTAGCG ATCAAGCTGG CAACGGGTGC TAACGCGCTG
GATACCGCAT CAGCGGTTCG TGAAAAAATT GCTGAGATGA AGCCTTTCTT CCCGCAGGGG
TTAGAAGTGG TTTATCCATA CGATACAACA CCTTTCGTAG AGCAATCTAT CGAAGGTGTG
GTGCATACCT TGCTTGAAGC GATCGTACTT GTGTTCGTCA TCATGTACCT CTTCCTGCAA
AACTTCCGTG CAACCTTGAT CCCGACCATT GCGGTACCTG TGGTATTGCT GGGTACCTTT
GCGATTCTAT CGATGGCAGG GTTCTCGATT AACACCCTAA CCATGTTCGC TATGGTGCTC
GCCATCGGTT TGTTGGTGGA CGATGCGATT GTGGTGGTGG AAAACGTCGA GCGGGTGATG
TCCGAAGAGG GCTTAAGTCC ACTCGAAGCG ACGCGTAAGT CGATGGACCA AATTACCGGT
GCCTTAGTCG GTATTGGTCT GACCCTATCC GCTGTGTTTG TACCTATGGC ATTTATGTCA
GGTTCAACGG GTGTGATCTA CCGTCAGTTC TCGATCACTA TCGTCTCTGC GATGGCGCTG
TCTGTACTGG TGGCGTTGAT TTTAACGCCA GCACTGTGTG CGACTATGCT CAAGCCTGTC
AAGAAGGGCC ATGGTCACAT AGAAACAGGC TTCTTCGGTT GGTTTAACCG TACTTTCGAC
AAGCTGACTA ATCGTTATGA GTCGAGCGTA GCTGGGATCA TCAAGCGCAG CTTCAGAGTC
ATGACGATTT ACGTTGTGCT GGTTATTGCA GTGGGTTGGA TCTTCATCCG TATGCCTACC
GCCTTCTTGC CAGACGAAGA CCAAGGTATT TTGTTTACCC AAGCGATTTT GCCGACTAAC
TCAACCCAAG AAAGCACTCT AAAAGTATTG GAGAAAGTCT CTGATCACTT TATGGCTGAA
GAAGGCGTGA GATCGGTATT TAGTGTGGCG GGCTTCAGTT TTGCTGGTCA AGGGCAAAAC
ATGGGTATCG CTTTCGTTGG CTTGAAGGAT TGGTCTGAGC GTGAAGCGCC TGGCATGGAC
GTTAAGTCTA TTGCGGGTCG TGCCATGGGT GTGTTCGGCC AGATGAAAGA TGCCTTAGTC
TTCGCCTTCG TACCGCCTGC GGTGATCGAG TTGGGTACGG CGAACGGTTT CGACATGTAC
TTGCAGGATA AGAACGGCCA AGGTCACGAG AAGTTAGTGG CGGCACGTAA CCAACTGCTG
GGCATGGCGG CACAGAATCC AAATCTGGTG GGCGTGCGTC CTAACGGTCA AGAAGATGCG
CCGATTTATC AATTACATGT AGATCACGCT AAGTTAAGCG CGTTAGGCAT TGAAATCACC
AATGTGAACA GTGTACTTGC AACGGCTTGG GGTGGTTCTT ATGTTAACGA CTTTATTGAC
CGCGGCCGCG TGAAAAAAGT GTATGTGCAA GGTGATGCCC AGTATCGTAT GCAGCCAGGA
GACTTAGACT CTTGGTACGT GCGTAACAAC AAGGGTGACA TGGTGCCATT CTCTGCCTTT
GCGACGGGTA CATGGGAATT CGGTTCACCA CGTCTAGAGC GCTTTAACGG CTTACCGTCG
ATGAACATTC AGGGTGCTAC GGCTCCTGGG TTCAGTACCG GTGCGGCGAT GGAAATCATG
GAAGACCTTG CTAAGCAGCT TCCTCCTGGC TTTGGTGTCG AGTGGAACGG CTTATCGTAC
GAAGAGCGTC TATCGGGTAA CCAAGCGCCT GCGCTGTATG CCTTGTCGAT CTTAGTGGTG
TTCCTCGTAC TGGCGGCACT CTATGAGAGC TGGTCGGTGC CGTTTGCTGT TGTGCTTGTG
GTGCCACTCG GGATCATCGG TGCCTTAGTT GCAATGAACG GTCGCGGCTT GCCAAACGAC
GTGTTCTTCC AAGTGGGACT GTTAACCACA GTGGGCTTGG CAACTAAGAA TGCCATCTTG
ATTGTAGAAT TCGCGAAAGA GTTCTACGAG AAAGGTTCAG GCTTAGTCGA GGCGACCTTG
CATGCGGTAC GTGTACGTTT GCGTCCTATT CTGATGACGT CTCTTGCCTT TGGTTTAGGT
GTAGTGCCGT TAGCCATTAG CTCGGGTGTG GGTTCTGGTA GCCAAAACGC CATCGGTACT
GCGGTACTTG GCGGTATGAT GAGCTCGACT TTCCTAGGTA TCTTCTTCGT ACCATTATTC
TTCGTGATAG TGGAGCGTAT CTTCAGTAAG CGTGAGAAGA AAGGTAAGGA AGAGAAGCCA
AGCTCAGCTG AGTAA
 
Protein sequence
MARFFIDRPI FAWVIALIIM LAGILSIRSL PVSQYPNIAP PTVVISANYP GASAKIVEDS 
VTQVIEQRMT GIDHLRYISS TSDSFGNASI TLTFNAEADP DIAQVQVQNK LQGAMTLLPQ
EVQSQGVNVN KSSSGFLMVL GFVSTDGSLD KGDIADYVGA NIQDPMSRVP GVGEIQLFGA
QYAMRIWLDP LKLTQYNLTS LDVIAAIRSQ NAQVSAGQLG GAPSVAGQEL NATVSAQSRL
QTAEEFRKII LKSDISGANV FLGDVARVEL GSESYAVVSL YNGQPATGLA IKLATGANAL
DTASAVREKI AEMKPFFPQG LEVVYPYDTT PFVEQSIEGV VHTLLEAIVL VFVIMYLFLQ
NFRATLIPTI AVPVVLLGTF AILSMAGFSI NTLTMFAMVL AIGLLVDDAI VVVENVERVM
SEEGLSPLEA TRKSMDQITG ALVGIGLTLS AVFVPMAFMS GSTGVIYRQF SITIVSAMAL
SVLVALILTP ALCATMLKPV KKGHGHIETG FFGWFNRTFD KLTNRYESSV AGIIKRSFRV
MTIYVVLVIA VGWIFIRMPT AFLPDEDQGI LFTQAILPTN STQESTLKVL EKVSDHFMAE
EGVRSVFSVA GFSFAGQGQN MGIAFVGLKD WSEREAPGMD VKSIAGRAMG VFGQMKDALV
FAFVPPAVIE LGTANGFDMY LQDKNGQGHE KLVAARNQLL GMAAQNPNLV GVRPNGQEDA
PIYQLHVDHA KLSALGIEIT NVNSVLATAW GGSYVNDFID RGRVKKVYVQ GDAQYRMQPG
DLDSWYVRNN KGDMVPFSAF ATGTWEFGSP RLERFNGLPS MNIQGATAPG FSTGAAMEIM
EDLAKQLPPG FGVEWNGLSY EERLSGNQAP ALYALSILVV FLVLAALYES WSVPFAVVLV
VPLGIIGALV AMNGRGLPND VFFQVGLLTT VGLATKNAIL IVEFAKEFYE KGSGLVEATL
HAVRVRLRPI LMTSLAFGLG VVPLAISSGV GSGSQNAIGT AVLGGMMSST FLGIFFVPLF
FVIVERIFSK REKKGKEEKP SSAE