Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_4211 |
Symbol | |
ID | 7089152 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 5004126 |
End bp | 5007260 |
Gene Length | 3135 bp |
Protein Length | 1044 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643463085 |
Product | transporter, hydrophobe/amphiphile efflux-1 (HAE1) family |
Protein accession | YP_002360100 |
Protein GI | 217975349 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 95 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACGTT TTTTTATTGA TCGCCCCATC TTTGCGTGGG TGATCGCCTT GATTATTATG CTGGCGGGGA TCCTCTCGAT CCGCTCGCTG CCAGTGTCTC AATATCCTAA CATTGCACCA CCCACCGTGG TGATCAGTGC TAACTATCCT GGCGCTTCCG CTAAAATTGT TGAAGATTCT GTGACTCAGG TGATTGAGCA ACGTATGACG GGTATCGATC ACCTCCGTTA TATCTCCTCA ACCAGTGACA GTTTTGGTAA TGCGTCTATT ACCTTAACCT TCAACGCCGA AGCCGATCCG GATATTGCAC AGGTTCAAGT TCAGAACAAG TTACAGGGCG CTATGACCCT GTTACCGCAA GAAGTGCAGT CGCAAGGGGT TAACGTTAAC AAGTCGAGTT CAGGCTTCTT AATGGTATTA GGCTTCGTAT CGACCGACGG TTCGTTAGAT AAAGGCGATA TCGCCGACTA CGTTGGTGCG AACATTCAAG ATCCTATGAG CCGTGTTCCG GGTGTAGGTG AAATTCAGCT GTTCGGTGCC CAATATGCGA TGCGTATATG GCTAGATCCG TTGAAGTTGA CTCAATATAA CTTAACTAGC TTAGATGTTA TTGCGGCTAT TCGTTCTCAA AACGCTCAAG TCTCCGCTGG ACAGTTAGGT GGCGCGCCAT CTGTTGCTGG CCAAGAGCTG AACGCGACGG TATCGGCTCA AAGCCGCTTA CAAACGGCTG AAGAGTTTCG CAAGATTATC CTTAAATCGG ATATTTCAGG TGCAAATGTC TTCCTCGGTG ATGTGGCGCG AGTTGAGTTA GGTTCTGAAA GTTATGCCGT GGTGTCACTG TATAATGGTC AACCTGCAAC AGGGTTAGCG ATCAAGCTGG CAACGGGTGC TAACGCGCTG GATACCGCAT CAGCGGTTCG TGAAAAAATT GCTGAGATGA AGCCTTTCTT CCCGCAGGGG TTAGAAGTGG TTTATCCATA CGATACAACA CCTTTCGTAG AGCAATCTAT CGAAGGTGTG GTGCATACCT TGCTTGAAGC GATCGTACTT GTGTTCGTCA TCATGTACCT CTTCCTGCAA AACTTCCGTG CAACCTTGAT CCCGACCATT GCGGTACCTG TGGTATTGCT GGGTACCTTT GCGATTCTAT CGATGGCAGG GTTCTCGATT AACACCCTAA CCATGTTCGC TATGGTGCTC GCCATCGGTT TGTTGGTGGA CGATGCGATT GTGGTGGTGG AAAACGTCGA GCGGGTGATG TCCGAAGAGG GCTTAAGTCC ACTCGAAGCG ACGCGTAAGT CGATGGACCA AATTACCGGT GCCTTAGTCG GTATTGGTCT GACCCTATCC GCTGTGTTTG TACCTATGGC ATTTATGTCA GGTTCAACGG GTGTGATCTA CCGTCAGTTC TCGATCACTA TCGTCTCTGC GATGGCGCTG TCTGTACTGG TGGCGTTGAT TTTAACGCCA GCACTGTGTG CGACTATGCT CAAGCCTGTC AAGAAGGGCC ATGGTCACAT AGAAACAGGC TTCTTCGGTT GGTTTAACCG TACTTTCGAC AAGCTGACTA ATCGTTATGA GTCGAGCGTA GCTGGGATCA TCAAGCGCAG CTTCAGAGTC ATGACGATTT ACGTTGTGCT GGTTATTGCA GTGGGTTGGA TCTTCATCCG TATGCCTACC GCCTTCTTGC CAGACGAAGA CCAAGGTATT TTGTTTACCC AAGCGATTTT GCCGACTAAC TCAACCCAAG AAAGCACTCT AAAAGTATTG GAGAAAGTCT CTGATCACTT TATGGCTGAA GAAGGCGTGA GATCGGTATT TAGTGTGGCG GGCTTCAGTT TTGCTGGTCA AGGGCAAAAC ATGGGTATCG CTTTCGTTGG CTTGAAGGAT TGGTCTGAGC GTGAAGCGCC TGGCATGGAC GTTAAGTCTA TTGCGGGTCG TGCCATGGGT GTGTTCGGCC AGATGAAAGA TGCCTTAGTC TTCGCCTTCG TACCGCCTGC GGTGATCGAG TTGGGTACGG CGAACGGTTT CGACATGTAC TTGCAGGATA AGAACGGCCA AGGTCACGAG AAGTTAGTGG CGGCACGTAA CCAACTGCTG GGCATGGCGG CACAGAATCC AAATCTGGTG GGCGTGCGTC CTAACGGTCA AGAAGATGCG CCGATTTATC AATTACATGT AGATCACGCT AAGTTAAGCG CGTTAGGCAT TGAAATCACC AATGTGAACA GTGTACTTGC AACGGCTTGG GGTGGTTCTT ATGTTAACGA CTTTATTGAC CGCGGCCGCG TGAAAAAAGT GTATGTGCAA GGTGATGCCC AGTATCGTAT GCAGCCAGGA GACTTAGACT CTTGGTACGT GCGTAACAAC AAGGGTGACA TGGTGCCATT CTCTGCCTTT GCGACGGGTA CATGGGAATT CGGTTCACCA CGTCTAGAGC GCTTTAACGG CTTACCGTCG ATGAACATTC AGGGTGCTAC GGCTCCTGGG TTCAGTACCG GTGCGGCGAT GGAAATCATG GAAGACCTTG CTAAGCAGCT TCCTCCTGGC TTTGGTGTCG AGTGGAACGG CTTATCGTAC GAAGAGCGTC TATCGGGTAA CCAAGCGCCT GCGCTGTATG CCTTGTCGAT CTTAGTGGTG TTCCTCGTAC TGGCGGCACT CTATGAGAGC TGGTCGGTGC CGTTTGCTGT TGTGCTTGTG GTGCCACTCG GGATCATCGG TGCCTTAGTT GCAATGAACG GTCGCGGCTT GCCAAACGAC GTGTTCTTCC AAGTGGGACT GTTAACCACA GTGGGCTTGG CAACTAAGAA TGCCATCTTG ATTGTAGAAT TCGCGAAAGA GTTCTACGAG AAAGGTTCAG GCTTAGTCGA GGCGACCTTG CATGCGGTAC GTGTACGTTT GCGTCCTATT CTGATGACGT CTCTTGCCTT TGGTTTAGGT GTAGTGCCGT TAGCCATTAG CTCGGGTGTG GGTTCTGGTA GCCAAAACGC CATCGGTACT GCGGTACTTG GCGGTATGAT GAGCTCGACT TTCCTAGGTA TCTTCTTCGT ACCATTATTC TTCGTGATAG TGGAGCGTAT CTTCAGTAAG CGTGAGAAGA AAGGTAAGGA AGAGAAGCCA AGCTCAGCTG AGTAA
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Protein sequence | MARFFIDRPI FAWVIALIIM LAGILSIRSL PVSQYPNIAP PTVVISANYP GASAKIVEDS VTQVIEQRMT GIDHLRYISS TSDSFGNASI TLTFNAEADP DIAQVQVQNK LQGAMTLLPQ EVQSQGVNVN KSSSGFLMVL GFVSTDGSLD KGDIADYVGA NIQDPMSRVP GVGEIQLFGA QYAMRIWLDP LKLTQYNLTS LDVIAAIRSQ NAQVSAGQLG GAPSVAGQEL NATVSAQSRL QTAEEFRKII LKSDISGANV FLGDVARVEL GSESYAVVSL YNGQPATGLA IKLATGANAL DTASAVREKI AEMKPFFPQG LEVVYPYDTT PFVEQSIEGV VHTLLEAIVL VFVIMYLFLQ NFRATLIPTI AVPVVLLGTF AILSMAGFSI NTLTMFAMVL AIGLLVDDAI VVVENVERVM SEEGLSPLEA TRKSMDQITG ALVGIGLTLS AVFVPMAFMS GSTGVIYRQF SITIVSAMAL SVLVALILTP ALCATMLKPV KKGHGHIETG FFGWFNRTFD KLTNRYESSV AGIIKRSFRV MTIYVVLVIA VGWIFIRMPT AFLPDEDQGI LFTQAILPTN STQESTLKVL EKVSDHFMAE EGVRSVFSVA GFSFAGQGQN MGIAFVGLKD WSEREAPGMD VKSIAGRAMG VFGQMKDALV FAFVPPAVIE LGTANGFDMY LQDKNGQGHE KLVAARNQLL GMAAQNPNLV GVRPNGQEDA PIYQLHVDHA KLSALGIEIT NVNSVLATAW GGSYVNDFID RGRVKKVYVQ GDAQYRMQPG DLDSWYVRNN KGDMVPFSAF ATGTWEFGSP RLERFNGLPS MNIQGATAPG FSTGAAMEIM EDLAKQLPPG FGVEWNGLSY EERLSGNQAP ALYALSILVV FLVLAALYES WSVPFAVVLV VPLGIIGALV AMNGRGLPND VFFQVGLLTT VGLATKNAIL IVEFAKEFYE KGSGLVEATL HAVRVRLRPI LMTSLAFGLG VVPLAISSGV GSGSQNAIGT AVLGGMMSST FLGIFFVPLF FVIVERIFSK REKKGKEEKP SSAE
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