Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_4161 |
Symbol | |
ID | 7088484 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 4940418 |
End bp | 4942817 |
Gene Length | 2400 bp |
Protein Length | 799 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 643463040 |
Product | TonB-dependent receptor |
Protein accession | YP_002360055 |
Protein GI | 217975304 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 81 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCATTCCG TTGAATTTGG CCGTTCGCGA CCCAAAAAAT ACCGCGCTAA CTACTTGTCC CTTATGGGCC TGAGTTTCAC CATCATCTTA AGCATTACAG CACCGCAGCC ATCACAGGCT CAAACTGTCG ATGTTGATGC CAGACAAATC AACAAGCTAC AACATTATCA AATTAAGGCG GGCACGCTCG ATGCCGTACT CAACAGCTTT GCTCTGGCCG CGAATATTGA TCTATCGATA TCTTCAGCAC TCACTCGGGG TAAAACCAGC TTAGGGCTAG AGGGACAATA TTCGATTGAA GCAGGCTTAC AAAAAATACT GGCAGGGACG GGTTTACAGG TCACATCGCG CCTTGAGGGG CAATATATTC TCGGCAAGGC GACCGCCGCA ATAGTGTTGG CACCCATAAC GGTTATCAGC GCTGCGGGTT ATGAACAGGA TATCAAAAAT GCGCCAGCGA GCATTAGTGT GCTTTCAGGC AAGGATCTAG AGCAACGCAA ATTTAATTCA CTGCAAGATA TCGCGCGGGA AATTCCCGGT GTCAATGTGA TTGGCTCTGG CGCACAGAGC GGAATATCCA TACGCGGCAT GGAGAAGGGT TATACGTTAG TGCTCGTTGA CGGCAAGCGG GTACGCTCGG ACACGGGAAA TCCGCGAGGA TTGAACAACG AAGATCTCGA TAGCAATTTT ATCCCTCCCG TTGCGTCGAT TGAGCGCGTC GAAGTAGTTC GTGGACCTAT GAGTTCTCTC TACGGTAGCG ATGCAATGGG CGGCATCATC AATATCATTA CCAAAAAAAC ACCCGAACAT TGGAGTGCTA GCGCGGGCTA TAGTTTGCGC GTGCCAGACA GCAGCGCTAT GGGGAATCAA AACCAACAGG ATATCTATAT TTCGGGGCCG CTGGTTAAAG ATCTGCTTGG TGCTTCCATT TGGGGAAATC AAGCCGTTCA GGACGAAGAC AAATATTACG GTGGATATCA GGAATCCACT AAGCGAACCC TAGGCGGTAA GCTGCGGATC ACGCCTAATC GCGACCACGA GTTTATCCTC GACTACTCAA AGGCGAGTCA GCGCTACATT GGCAATCCTG GTGGAGTTCT ACTCACCACA GCCAGAGGAA GTATTGACCG CGAATGGACC CGAGATGCAT GGAGCATTGC CTACAATGCC TTGTTCGATC TTGGCGAACT AGAACTGAAA TACTATGAAG AAGATTATGA AAGACTGACT TATCCTGCTG CAGCTGATTT CACTACAGGC TCAACAAACA AAGTCGGCGA TGTGCGCTTC ATCACAGGTG TGGATAGCCA TACTCTGACT TTCGGTGGTC AATGGACTAA CGACAAACTG ACTAACGGTG ATTTAGGTAA TGGCACTCCC CGAAGCTTTG GTACCCGCTC TGTCAGCGAT ATCAGTATTT TTGCAGAAGA CGAATGGGAA CTGCTCACAG AGAAACTGTA TCTCACCCTT GGTGCGCGAC TAACGGATAA CGAATTCTTT GGTCATCATG TCTCACCTAG AGCATATCTT GTTTTCAATC ATAACGATCA CTGGACTTTC AAAGGGGGCA TAGCCACTGG CTACAAGAGC CCGAAGATTG ACCAGATTGA TAACACCACA GGCTCTCAAC GCGGCGGCAG TACGAGTCAG TTTGTCATTG TTGGTAATCC CGACTTAGAG CCAGAACAAA GCACGAATTA TGAAATCGGC GCGCTTTACA CTAAAGATGA CACGCTAAAT ATCGGCGCAA CGCTATTTTT CAATGACTTT TCCAACAAAA TCCTCAACAC CAACACCTTC TATTTCGACG ATGGTAACGG TGGATATATT CCAGCCTATT GCATTTCAGG TGACGTTGGT ACCAAAGACT GCCCAGCTTG GGCCACTTGG CTAAATGCCA AGGGAGCACA GATCCGCGGT GTCGAACTTG AAGGCCACTG GGACATAGCT GATACCTTGG CGCTCAAAGC GAGTTACACC TATACCGATT CACGAATTGA CGCAGACAAC GTGATCATCA ATACCCCCGC GGGTCCACGC CCTTTCGGTG ACACCTTGGC ATTGCTGGAC GGAAATTCGC TCGTCGGTAT CCCAAATCAT AACGGCTCAA TTACCCTCGA CTACCAACCC ACAGATGCAC TCTCGGCATT CCTAAGAGGT AATTATGAGG GCGAAATTAC CCGAGTCAGC TTCGAACGCA ACACGGTCGA TAAGAGTGAC AAGGATTTGA TCACGCTGGA CGCAGGTCTG AACTATTCGC TGAACCGCTT TATTAGCTTC AACGTCGGGA TAGACAACAT CACCGACGCT ACGCGATTTA AAGTCAATAA CGATACTGGG GCCTACCGCT ATTCAGAGCG CGGACGTAGC TATTTCGTTA GCGTTAAGAC GCAATTCTGA
|
Protein sequence | MHSVEFGRSR PKKYRANYLS LMGLSFTIIL SITAPQPSQA QTVDVDARQI NKLQHYQIKA GTLDAVLNSF ALAANIDLSI SSALTRGKTS LGLEGQYSIE AGLQKILAGT GLQVTSRLEG QYILGKATAA IVLAPITVIS AAGYEQDIKN APASISVLSG KDLEQRKFNS LQDIAREIPG VNVIGSGAQS GISIRGMEKG YTLVLVDGKR VRSDTGNPRG LNNEDLDSNF IPPVASIERV EVVRGPMSSL YGSDAMGGII NIITKKTPEH WSASAGYSLR VPDSSAMGNQ NQQDIYISGP LVKDLLGASI WGNQAVQDED KYYGGYQEST KRTLGGKLRI TPNRDHEFIL DYSKASQRYI GNPGGVLLTT ARGSIDREWT RDAWSIAYNA LFDLGELELK YYEEDYERLT YPAAADFTTG STNKVGDVRF ITGVDSHTLT FGGQWTNDKL TNGDLGNGTP RSFGTRSVSD ISIFAEDEWE LLTEKLYLTL GARLTDNEFF GHHVSPRAYL VFNHNDHWTF KGGIATGYKS PKIDQIDNTT GSQRGGSTSQ FVIVGNPDLE PEQSTNYEIG ALYTKDDTLN IGATLFFNDF SNKILNTNTF YFDDGNGGYI PAYCISGDVG TKDCPAWATW LNAKGAQIRG VELEGHWDIA DTLALKASYT YTDSRIDADN VIINTPAGPR PFGDTLALLD GNSLVGIPNH NGSITLDYQP TDALSAFLRG NYEGEITRVS FERNTVDKSD KDLITLDAGL NYSLNRFISF NVGIDNITDA TRFKVNNDTG AYRYSERGRS YFVSVKTQF
|
| |