| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_4126 |
|---|
| Symbol | |
|---|
| ID | 7088449 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 4895503 |
|---|
| End bp | 4896294 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 643463005 |
|---|
| Product | competence protein ComF |
|---|
| Protein accession | YP_002360020 |
|---|
| Protein GI | 217975269 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1040] Predicted amidophosphoribosyltransferases |
|---|
| TIGRFAM ID | [TIGR00201] comF family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 64 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCACT TTGTCAAAAG GATTTGGCCG CAATCTGCTT TGCAGATAAT GCGTTTAGGC
TATCAACTCA GCACAAGGTT GTTGGCGGGC AGTTTACCTA ACCGTTGCCT GCTGTGCCAC
CAATCCATAC CTATCCCCGA GACGGGCATT TGCATCGTTT GTCTTCAATC TGGCTTATAC
CATGGACCTA TTTGCTTAGG CTGCGGTAAG TCGATGCAAA TCGAGGTCGA TTATTGCGGG
GAATGTCAAA AGCGCCAGCC ACGTAAAGTC GTTGCGCCCT GCAGTTATCA TCAAGGTTTA
GGGGCTTGGA TTGGCGCGAT TAAATATCAA GGGCAACTTG CCGCTTTACC TGTGCTATGC
CGTGCCTTAG TGGCACGAAT TAAGCTATTA GAACTGCAAG GATTAATCAC GCTGCCCCAA
GCGATAGTGC CAGTTCCATT GCATCCAAAA CGCTTGCAAC AACGGGGATT TAATCAGGCG
TGGTTAATTG CCCATGAGTT ATCACAGCTA TTACAACTGC CATTAGTGAG CGAGGGATTA
ACGCGCCAGC AAGACACTCG GCCGCAGGCC GGACTTTCAG GTGCACAGCG ACGACGCAAC
TTACACGATG CCTTTATGTT AGCGGATGAT TTTGCGTTCC AGCGGATTGC ACTGGTGGAT
GATGTGGTCA CGACAGGCAC CACAGTCTCT GAAATTGCCC GCTTATTCGA AGCGCGATAC
GTACATGTGC AGGTATGGTG TCTGGCAAGG GCAGAGGCGC CAGGCTTGTT GGATGATCTC
GATAATGAAT GA
|
|---|
| Protein sequence | MPHFVKRIWP QSALQIMRLG YQLSTRLLAG SLPNRCLLCH QSIPIPETGI CIVCLQSGLY
HGPICLGCGK SMQIEVDYCG ECQKRQPRKV VAPCSYHQGL GAWIGAIKYQ GQLAALPVLC
RALVARIKLL ELQGLITLPQ AIVPVPLHPK RLQQRGFNQA WLIAHELSQL LQLPLVSEGL
TRQQDTRPQA GLSGAQRRRN LHDAFMLADD FAFQRIALVD DVVTTGTTVS EIARLFEARY
VHVQVWCLAR AEAPGLLDDL DNE
|
|---|
| |