Gene Sbal223_4058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_4058 
Symbol 
ID7089676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp4813084 
End bp4814268 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content47% 
IMG OID643462936 
Productelongation factor Tu 
Protein accessionYP_002359954 
Protein GI217975203 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0050] GTPases - translation elongation factors 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000300553 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000424973 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGCAAAAG CTAAATTTGA ACGTATTAAG CCTCACGTAA ACGTGGGCAC CATTGGTCAC 
GTTGACCATG GTAAAACCAC ACTGACTGCA GCTATCTCTC ACGTACTGGC TAAGACCTAC
GGTGGCGAAG CTAAAGACTT CTCTCAAATC GATAACGCTC CAGAAGAGCG TGAGCGCGGT
ATTACAATCA ATACCTCTCA CATCGAATAT GACACGCCTT CACGTCACTA CGCACACGTA
GACTGCCCAG GCCATGCTGA CTATGTTAAA AACATGATCA CTGGTGCTGC ACAGATGGAC
GGCGCGATTC TAGTAGTAGC TTCAACAGAC GGTCCAATGC CACAGACTCG TGAGCACATC
CTGCTTTCTC GTCAGGTTGG CGTACCGTAC ATCATCGTGT TCATGAACAA ATGTGACATG
GTAGATGACG AAGAATTACT GGAATTGGTA GAAATGGAAG TTCGTGAACT TCTGTCAGAA
TACGATTTCC CAGGTGATGA CTTACCAGTA ATCCAAGGTT CAGCTCTGAA GGCGCTAGAA
GGCCAACCAG AGTGGGAAGC TAAGATTATT GAACTGGCTA ACGCACTGGA TTCTTACATT
CCAGAACCAC AACGTGACAT CGATAAGCCG TTCCTACTGC CAATCGAAGA CGTATTCTCA
ATCTCTGGCC GTGGTACTGT AGTAACTGGC CGTGTTGAGC GTGGTATTGT TAAAGTTGGT
GACGAAGTTG AAATCGTTGG TGTTCGCACT ACGACTAAAA CAACGTGTAC TGGCGTAGAA
ATGTTCCGTA AGCTGCTTGA CGAAGGTCGT GCAGGCGAGA ACTGTGGTGT GTTATTACGT
GGTACTAAGC GTGATGACGT AGAACGTGGT CAAGTATTGG CTAAACCAGG CTCAATCAAC
CCACACACTA CTTTTGAATC AGAAGTTTAT GTTCTGTCAA AAGAAGAAGG CGGACGTCAC
ACTCCATTCT TCAAAGGCTA CCGTCCACAG TTCTACTTCC GTACAACAGA CGTGACTGGT
ACTATCGAAC TGCCAGAAGG CGTAGAGATG GTAATGCCTG GCGACAACAT CAAAATGGTA
GTTACTCTGA TTTGCCCAAT CGCGATGGAC GAAGGTTTAC GCTTCGCAAT CCGTGAAGGT
GGTCGTACAG TAGGTGCTGG TGTAGTAGCT AAAATCATTG CTTAA
 
Protein sequence
MAKAKFERIK PHVNVGTIGH VDHGKTTLTA AISHVLAKTY GGEAKDFSQI DNAPEERERG 
ITINTSHIEY DTPSRHYAHV DCPGHADYVK NMITGAAQMD GAILVVASTD GPMPQTREHI
LLSRQVGVPY IIVFMNKCDM VDDEELLELV EMEVRELLSE YDFPGDDLPV IQGSALKALE
GQPEWEAKII ELANALDSYI PEPQRDIDKP FLLPIEDVFS ISGRGTVVTG RVERGIVKVG
DEVEIVGVRT TTKTTCTGVE MFRKLLDEGR AGENCGVLLR GTKRDDVERG QVLAKPGSIN
PHTTFESEVY VLSKEEGGRH TPFFKGYRPQ FYFRTTDVTG TIELPEGVEM VMPGDNIKMV
VTLICPIAMD EGLRFAIREG GRTVGAGVVA KIIA