Gene Sbal223_4056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_4056 
SymbolrplC 
ID7089674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp4811768 
End bp4812406 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content47% 
IMG OID643462934 
Product50S ribosomal protein L3 
Protein accessionYP_002359952 
Protein GI217975201 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0087] Ribosomal protein L3 
TIGRFAM ID[TIGR03625] 50S ribosomal protein L3, bacterial 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000139517 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000018898 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTATCG GTCTTATTGG TCGTAAAGTT GGTATGACTC GCATCTTCAC TGAAGATGGT 
GTTTCAATAC CAGTTACTGT AATTGAAGTT GCAGGCAACC GTGTTACTCA AGTGAAAACT
TTAGAAACTG ACGGCTACCG TGCACTTCAA GTTACAACTG GCACCAAAAA AGCCAATCGC
ATCACTAAAC CAGAAGCAGG TCACTTTGCC AAGAGCGGCG TTGAAGCCGG TCGTGGTTTG
TGGGAAATGC GTTTGGTAGA CGGTGAAGGC GAGGGCATTG AAGTTGGTGC TGAGCTAAAT
GTTGATATTT TCGCAGACGT AGCGAAAGTA GATGTTACTG GTCAATCAAA AGGTAAAGGC
TTCCAAGGCG GCGTTAAGCG TTGGAACTTC CGTACTCAAG ATATGACTCA CGGTAACTCT
TTGTCGCACC GCTCGAATGG TTCTATCGGT CAGAACCAAA CGCCTGGTCG CGTATTCAAA
GGCAAAAAAA TGTCAGGCCA TATGGGTGCC GAGCGTGTTA CTACTCAAAA TCTAGTTGTA
GTTCGTGTAG ATGTTGAGCG TAACCTGCTA CTAGTCCGTG GCGCTGTTCC TGGCGCTACC
AATGGCGACT TGATTATCAA GCCTGCCGTT AAAGCTTAA
 
Protein sequence
MAIGLIGRKV GMTRIFTEDG VSIPVTVIEV AGNRVTQVKT LETDGYRALQ VTTGTKKANR 
ITKPEAGHFA KSGVEAGRGL WEMRLVDGEG EGIEVGAELN VDIFADVAKV DVTGQSKGKG
FQGGVKRWNF RTQDMTHGNS LSHRSNGSIG QNQTPGRVFK GKKMSGHMGA ERVTTQNLVV
VRVDVERNLL LVRGAVPGAT NGDLIIKPAV KA