| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_4041 |
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| Symbol | rplF |
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| ID | 7089659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 4805094 |
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| End bp | 4805627 |
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| Gene Length | 534 bp |
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| Protein Length | 177 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 643462919 |
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| Product | 50S ribosomal protein L6 |
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| Protein accession | YP_002359937 |
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| Protein GI | 217975186 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0097] Ribosomal protein L6P/L9E |
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| TIGRFAM ID | [TIGR03654] ribosomal protein L6, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0000805939 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000000000307302 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGTCTCGTG TAGCAAAAGC ACCAGTATCT ATTCCAGCTG GCGTAGAGGT GACCTTGAAC
GAACAGACCC TTACCGTCAA AGGCGGAAAA GGTAGTCTGA CTCGAGTGAT CAACAATGCG
GTCAATGTTG TTATTGAAGC TGGCGTAGTT AAGTTCCTCC CTGTTGAAGG CGTTTCTAAC
GCTTGGGCAC AGGCTGGTAC AACTCGTGCA TTAGTAAACA ACATGGTTGT TGGTGTATCT
CAAGGTTTTG AGCGTAAATT AAAGTTAGTT GGCGTTGGTT ACCGTGCGAA ACTCGTCGGT
TCTGACATTG ACCTTACTTT AGGTTTCTCT CATCCGTTAG TACACAAACT GCCCGCAGGC
GTTACTGCAG AGTGCCCTAG CCAAACTGAC ATCGTCCTAC GTGGCGTTGA TAAACAGTTA
ATTGGCCAAG TCGCTGCTGA GATTCGCGGA TACCGTCCAC CAGAGCCATA TAAAGGCAAG
GGTGTTCGCT ATGACGACGA AGTAGTACGC CGTAAAGAGG CTAAGAAGAA GTAG
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| Protein sequence | MSRVAKAPVS IPAGVEVTLN EQTLTVKGGK GSLTRVINNA VNVVIEAGVV KFLPVEGVSN
AWAQAGTTRA LVNNMVVGVS QGFERKLKLV GVGYRAKLVG SDIDLTLGFS HPLVHKLPAG
VTAECPSQTD IVLRGVDKQL IGQVAAEIRG YRPPEPYKGK GVRYDDEVVR RKEAKKK
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