Gene Sbal223_4003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_4003 
SymbolaroK 
ID7086219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp4763818 
End bp4764333 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content45% 
IMG OID643462878 
Productshikimate kinase I 
Protein accessionYP_002359899 
Protein GI217975148 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000558194 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAA AACGTAATAT TTTTCTGGTA GGCCCTATGG GCGCAGGTAA AAGCACAATT 
GGTCGCCATC TGGCGCAAAT GCTGCATTTA GAATTCCACG ATTCAGATCA AGAGATTGAG
CAACGCACAG GCGCTGATAT TGCTTGGGTG TTTGACGTCG AAGGTGAAGA AGGCTTCCGT
CGTCGTGAAG CTCAGGTTAT TGCTGATTTG TCTGAAAAAC AAGGTATCGT CCTTGCCACC
GGTGGTGGTT CAGTACAAAG CAAAGATATC CGTAATCATC TGTCTGCTCG TGGCATTGTG
GTTTATCTGG AAACCACTAT CGACAAACAG GTCGCTCGTA CTCAAAGAGA CAAGCGACGC
CCATTATTGC AAGTGGATGA TCCTCGAGAA GTGTTGGAGA ATCTTGCAGA GATCCGTAAT
CCATTGTACG AAGAAATTGC CGATGTGATT GTCAAAACCG ATGATCAAAG CGCAAAGATT
GTCGCCAATC AGATCATTGA GCAATTAGGT TTTTAG
 
Protein sequence
MAEKRNIFLV GPMGAGKSTI GRHLAQMLHL EFHDSDQEIE QRTGADIAWV FDVEGEEGFR 
RREAQVIADL SEKQGIVLAT GGGSVQSKDI RNHLSARGIV VYLETTIDKQ VARTQRDKRR
PLLQVDDPRE VLENLAEIRN PLYEEIADVI VKTDDQSAKI VANQIIEQLG F