Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_3977 |
Symbol | |
ID | 7086192 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 4737053 |
End bp | 4738207 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 643462852 |
Product | porin Gram-negative type |
Protein accession | YP_002359873 |
Protein GI | 217975122 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAAGA CTTGTCTCGC CTTAGTGTTA CCTATGCTAT TAACGGCCAC CAGCAGTCAG GCGGTTGAGC TTTATAAAGA TCAAAAAAAT ACATTAGATT TAACCGGTTG GTTGGGGTTT GCCGCCCTGA ATGACAGCCA CGACACCTCG GTTATCGACG ATTCATCACG CTTAAGATTT AGCTTCGAGC GCAGTGAGAG AAACGGCTGG ACCGCCTTCG CCACCACAGA ATGGGGGATC AATATGGTCT CCAGCGACGA TGGCCTAGTG ATGCAAGGGG GCAAACTTGC CGCCGAAAAG ACCGATGATT TTCTCTATAA CCGCTTAGGT TATGTTGGCA TGTCCCACGA TGTCTGGGGG AGTTTGAGCT TTGGTAAACA ATGGGGCGCC TATTACGATG TCGCCGGCAC CACAGATTTA CCTAACGTTT TCGCAGGTTA CAGCGTTGGT GCTTACACCT TTGGCGATGG CGGCCTCACC GGCACTGGCC GTGCCGACTC CGCCTTTATT TACCGCAATA GTGTCGGCCC AGTGCAAATC GCCTTGCAAT ATGCAGCCAA AACCAATGGC GATGTCAGCT TAAAAAATGA TGACGGCAGC GAAATGAGTA ACTCTGAGTT GAGTTTCGAC AGCAGTTACG GCGCCAGCAT CACCTATGCG GCAACCGACA AGTTCAAGCT ACTCGCAGGC TTTAACCGCG GTGATTTTGA AGGCCACTTA GGTAATACCC AAGTCGATGA AACCAATGAA ATCATCGGTA TTGGTGCCAT GTATGGTGAC TACTACCACT ATGCCGAAGG ACGCGAAGCC AGCGGTCTCT ATGTGGGTTT TAACGCTCAC CAAAGTAAGA GTAATGAACT GGTCAATGGT GATCTCTACG ACGCCACTGG TGCCGAGTTG ATGACGGCCT ATCAATTCGA CAACGGTTTT GTGCCTATGG TCGTGCTCAG TTATTTAGAT TTAGACACAG ATGCAACTAC GCCCATCCAA GGTAATTGGA CCCGCCAATT TGCCATGCTG GGTCTGCACT ATCGCTATAG CAACGACACT GTGATGTTTG CTGAAATGAA GTTAGATTTC AGTGATATGG ATGATACCGC GCTCGAGGCC CAGGAAGACA ACAGCTTCGC AGTCGGGATT AATTACTTCT TTTAA
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Protein sequence | MNKTCLALVL PMLLTATSSQ AVELYKDQKN TLDLTGWLGF AALNDSHDTS VIDDSSRLRF SFERSERNGW TAFATTEWGI NMVSSDDGLV MQGGKLAAEK TDDFLYNRLG YVGMSHDVWG SLSFGKQWGA YYDVAGTTDL PNVFAGYSVG AYTFGDGGLT GTGRADSAFI YRNSVGPVQI ALQYAAKTNG DVSLKNDDGS EMSNSELSFD SSYGASITYA ATDKFKLLAG FNRGDFEGHL GNTQVDETNE IIGIGAMYGD YYHYAEGREA SGLYVGFNAH QSKSNELVNG DLYDATGAEL MTAYQFDNGF VPMVVLSYLD LDTDATTPIQ GNWTRQFAML GLHYRYSNDT VMFAEMKLDF SDMDDTALEA QEDNSFAVGI NYFF
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