Gene Sbal223_3917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_3917 
Symbol 
ID7086680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp4668665 
End bp4669837 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content48% 
IMG OID643462794 
Productprotein of unknown function DUF1006 
Protein accessionYP_002359815 
Protein GI217975064 
COG category[S] Function unknown 
COG ID[COG3214] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAATC CCTTTTCACC CCGCGAATGG CTGCAATTAA CGATGCAGCA GCAAGGATTA 
TTACAGCCAC AGACTTCGGT GGCTGAGACT GTCTTGCGCC TAAGTTATGT GCAAATCGAC
TCGATTAACG TGGTTGAGCG TGCGCATCAC CATGTGTTGC ATAGCCGTAT GCCCGGATAC
CAGCCGAAGA TGCTCGATTC GGCTTTAGCT AAAGGTGAGA TCTTCGAATA TTGGTCCCAT
GCGGCGGCCT ATTTACCGAT CGCCGATTAC CGTTTTAGTT TGCAACGTAA ACTGCAGCTG
CAAAATGGCG GTAAGCATTG GTTTGAGCCC GACGATAAAG TAATGCAAGA AGTGCGGGCA
CGAATCCTTG CAGAAGGGCC ACTCAAGGCC AGTGATTTTG AACACAGTGA AGGTAAAAAC
GGTGCCTGGT GGGATTGGAA GCCCGCGAAA AAAGCCCTAG AGCAGCTCTT TATGCGTGGT
GAGCTGATGG TGGTGCGGCG AGAGAAATTC CAGAAGGTTT ACGATCTTAC TGCGCGGGTG
TTACCACAAG ACATAAATGC CAAAGCACCG ACAGAGGCTG AATTTACCCG CTATCTGATT
GATCGTTATC TCGATGCCCA TGCCTTTGGT ACTGCGGCGC AAATAGCTTA TCTACGCAAA
GGCTTAAAAT CAGCAGTAGC CCAAGAGCTG GCAGAGATGC AGTCACAGGG GGGATTAGCG
AGTTTTAAGG CGGCGGGGCA AAGCTACTTT TACTACCCTG CATTACAGCT CCATGCGCCA
TTACCCAATA AAGTGTGGCT GCTTAATCCC TTCGATAATT TATTAATCCA ACGGCAACGG
CTAAAGCAAT GGTTTGATTT TGATTATCAA ATTGAAGTCT ATGTGCCCGC CGAAAAGCGT
CGGTATGGTT ATTATTCTTT AGCGATTCTG TGGCGCGATA CTTTTGTTGG CCGCGTGGAT
GTGAAAGCCG ATCGCCAAAC GGGCATCTTG TTATTGCAGC AATTGACCTT AGAAGCGGGC
GTGATGGTGA ATGGCCTAGA TGAGGATTTC TGTGCTGCCT TTGATATCGC CGTCAGTGAA
TATGCCCGCT TTAACGGTTG CGATCGCTGG AAGTTAGTTA AAGCAAATCA TAAAGGCCTT
AAGCAGAAGT ATGCTCGCCA ACAAAAGTGT TAG
 
Protein sequence
MSNPFSPREW LQLTMQQQGL LQPQTSVAET VLRLSYVQID SINVVERAHH HVLHSRMPGY 
QPKMLDSALA KGEIFEYWSH AAAYLPIADY RFSLQRKLQL QNGGKHWFEP DDKVMQEVRA
RILAEGPLKA SDFEHSEGKN GAWWDWKPAK KALEQLFMRG ELMVVRREKF QKVYDLTARV
LPQDINAKAP TEAEFTRYLI DRYLDAHAFG TAAQIAYLRK GLKSAVAQEL AEMQSQGGLA
SFKAAGQSYF YYPALQLHAP LPNKVWLLNP FDNLLIQRQR LKQWFDFDYQ IEVYVPAEKR
RYGYYSLAIL WRDTFVGRVD VKADRQTGIL LLQQLTLEAG VMVNGLDEDF CAAFDIAVSE
YARFNGCDRW KLVKANHKGL KQKYARQQKC