Gene Sbal223_3902 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_3902 
Symbol 
ID7086665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp4629030 
End bp4629770 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content52% 
IMG OID643462779 
ProductUroporphyrinogen III synthase HEM4 
Protein accessionYP_002359800 
Protein GI217975049 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1587] Uroporphyrinogen-III synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTCT TACTGACGCG CCCCGAGGGG CGCAATCAGT CCATGGTAGA TGCCTTGAAT 
GAACGAGGCA TTGCTCACTG GGTCACACCT CTGCTGTGTG TCGAAGCAAC GCCCGCTATC
GCAACGAATA CCCCGCATCC TTTGGCACAC GCCGATATGG TTATCTGCAT CAGCGCCAAT
GCAGTGACTT TTGCGGATAA CGCCTTAACT ACTACAAATC CACCCCATAA AGCTTGGCCT
CCAGCTCAGT ACTTCGCCGT GGGGCATGCG ACTTGGAAAG CATTAGACCA ACTCGGTATT
TCTGCCCTCG AAGCCCCAGA TGATTGCCAG CAGACCGAAG GGCTACTCAC GCTCGCGCCG
CTGCAAGAGA TTAAAGGTAA GCAGATTACT ATTATACGTG GTGTCGGTGG CCGTGAAGCC
TTAGCCGAAC AACTGGCTGC GCGCGGTGCA CATTTGCGCT ATTGGGAAGT GTATCAACGA
GCTTGCCCGC CACTCGATGG TCAACAGTTA GCTCTGCAAT GGCAAGCCTT CGGGATAGAC
ACTATTGTGG TGACCAGCGG TGAAGTACTG GATAACCTGA TTAATTTAGT GCCAAAAGAG
TTATTTGCAT GGCTGCGCTC ATGTCATATC ATAGTCCCAA GTAACCGAGT AGAAGCTCAA
GCTCACGCCT TTGGTATAAC CCAAGTCACC AATGCCAATG CCGCCAACAG CAAAGCCGTG
CTAAACGCCC TTAAACTCTA A
 
Protein sequence
MKVLLTRPEG RNQSMVDALN ERGIAHWVTP LLCVEATPAI ATNTPHPLAH ADMVICISAN 
AVTFADNALT TTNPPHKAWP PAQYFAVGHA TWKALDQLGI SALEAPDDCQ QTEGLLTLAP
LQEIKGKQIT IIRGVGGREA LAEQLAARGA HLRYWEVYQR ACPPLDGQQL ALQWQAFGID
TIVVTSGEVL DNLINLVPKE LFAWLRSCHI IVPSNRVEAQ AHAFGITQVT NANAANSKAV
LNALKL