| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3867 |
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| Symbol | |
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| ID | 7088902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 4593316 |
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| End bp | 4595028 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 643462744 |
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| Product | type IV-A pilus assembly ATPase PilB |
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| Protein accession | YP_002359765 |
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| Protein GI | 217975014 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02538] type IV-A pilus assembly ATPase PilB |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0000581945 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCATCTA CAGGCCTTCA CTTAGGGCTG TCGACCCTTT TTATCCGCAA AGGTCTGCTA
AATGAAGAGC AGATGGCTAA CGCTATCACT AAATCTCGAC AAAACAAACA CGCCCTTGTA
AGCACCTTAG TTCAAAGTAA GCTAATCTCT GCCCGTGCAA TAGCCGAGCT TTGCTATGAG
GAATATGGCA CTCCACTGCT TGACCTTAAT GAGTTTGATC TTGCCTCCAT TCCTGAAGAT
TTTCTCAATA AAAAACTCAT TGAAAAACAC CGTTGTTTAC CCTTGTTTAA ACGCGGTAAT
CGCCTCTATA TCGGCACATC CGACCCAACC AATATTGCAG CCCTCGAAGA TTTCCAGTTT
AGTGCAGGCC TGCACGCCGA AGCGATTCTA GTTGAGGAAG ATAAGCTCGC TAAAGCGCTA
GAGAAAATTC TCGAAGAAGA TATCAGCGGT CTCGATTTAG GCGGCATGGA CGAAGCAGCG
CTGGCAGCGA TAGAAATTAC TGATACAGAC AGACGTAGCG AAGAGTCTAC TGGTGAGAGT
AGTGACGATG CGCCTATTGT CATCTATATC AATAAAATTT TAACCGATGC GATTCGCAAA
GGTGCGTCAG ATTTACACTT TGAACCCTAT GAAAAGCGCT ACCGCATTCG TTTCCGTATA
GATGGTATTC TGCACGAAGT CTCTGAACCA CCTATTAGCC TCGCTGGTCG TTTATCGGCG
CGCCTAAAGG TAATGTCGAA ACTCGATATC GCCGAACGGC GTGTGCCACA AGATGGTCGA
ATTAAGATGA AACTATCCCG TACCAAGTCT ATCGACTTTC GGGTAAGCAC CTTACCGACG
CTCTGGGGCG AAAAAATTGT AATGCGGATT TTGGACTCAT CCTCCGCACA ATTAGGCATT
GAAAAGCTTG GCTACGAGCC GGATCAAGAG AAACTCTACC TTGAGATGCT GGCAAAACCC
CAAGGTATGA TTCTAGTGAC GGGTCCAACG GGTTCAGGTA AAACCGTCTC CCTTTACACA
GGGTTAAATA TTCTCAATAC CGAAGAGCGT AATATTTCTA CCGCTGAAGA TCCGGTTGAG
ATTAACCTTG AGGGCGTAAA CCAAGTTCAC ATTAATTTAA AGGCAGGCCT AACCTTCGCC
TCAGCACTGC GTTCGTTCTT ACGCCAAGAC CCAGATGTAG TGATGGTGGG CGAAATCCGC
GATCTGGAAA CCGCCGAAAT TGCCATTAAA GCGGCACAAA CGGGCCACTT AGTCTTATCG
ACCTTACACA CTAACTCGGC TGCCGAAACC TTAACCCGTT TAATCAACAT GGGTGTTCCT
GGCTACAATA TCGCTAGCTC AGTAAATCTG ATTATTGCAC AGCGCTTAGC GCGTCGCCTC
TGCCCAGAAT GTAAACAAGC TGAAGTGATA CCCGAGCATG AATTACTGCG CCTAGGCTTT
GCCCAAGCAC AAATTACTCA GGGCTTTACC GCCTTTAAAC CCATTGGCTG CGAACATTGC
TCAGCGGGCT ACAAGGGACG GGTTGGCATT TATGAAGTGA TGAAAATGTC TGATGAAATA
GCCCGCACTA TCATGGAAGG GGGGAACTCT TTACAAATCG CCTCCCAAGC TAAAGCGCAA
GGAATGCGGG ATTTGCGTCA ATCAGGATTA TTGAAAGTGA TCCACGGTGT TACTAGCATT
GCAGAAGTCA ATCGCGTAAC CAGTTTTGGC TAA
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| Protein sequence | MPSTGLHLGL STLFIRKGLL NEEQMANAIT KSRQNKHALV STLVQSKLIS ARAIAELCYE
EYGTPLLDLN EFDLASIPED FLNKKLIEKH RCLPLFKRGN RLYIGTSDPT NIAALEDFQF
SAGLHAEAIL VEEDKLAKAL EKILEEDISG LDLGGMDEAA LAAIEITDTD RRSEESTGES
SDDAPIVIYI NKILTDAIRK GASDLHFEPY EKRYRIRFRI DGILHEVSEP PISLAGRLSA
RLKVMSKLDI AERRVPQDGR IKMKLSRTKS IDFRVSTLPT LWGEKIVMRI LDSSSAQLGI
EKLGYEPDQE KLYLEMLAKP QGMILVTGPT GSGKTVSLYT GLNILNTEER NISTAEDPVE
INLEGVNQVH INLKAGLTFA SALRSFLRQD PDVVMVGEIR DLETAEIAIK AAQTGHLVLS
TLHTNSAAET LTRLINMGVP GYNIASSVNL IIAQRLARRL CPECKQAEVI PEHELLRLGF
AQAQITQGFT AFKPIGCEHC SAGYKGRVGI YEVMKMSDEI ARTIMEGGNS LQIASQAKAQ
GMRDLRQSGL LKVIHGVTSI AEVNRVTSFG
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