| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3833 |
|---|
| Symbol | |
|---|
| ID | 7088868 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 4541096 |
|---|
| End bp | 4541608 |
|---|
| Gene Length | 513 bp |
|---|
| Protein Length | 170 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 643462712 |
|---|
| Product | thioredoxin |
|---|
| Protein accession | YP_002359733 |
|---|
| Protein GI | 217974982 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3118] Thioredoxin domain-containing protein |
|---|
| TIGRFAM ID | [TIGR01068] thioredoxin |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGAGA TAATCATCAC TCAGCCTTTA AATAACCGTC CGTTAGCCCA ATATATTAGC
CGTATAGACG TTTTATTTTG GAGCTTTGCC ATGATTATTG CCTGCCCCCA TTGCGATACG
TTAAACCGCG TTCCCGATGA GCGTGTAAAC CAGCAACCTA CTTGCGGTAA ATGTAAGCTC
AGTGTCTTTA CGGCTGCGAC GATTGAACTC ACTAGCGCAA ACTTTGCCAA CCATGCCAAT
AAATCTGAGC TTCCCCTAGT CGTTGATTTT TGGGCCAGCT GGTGTGGCCC CTGTAAAAGT
TTTGCCCCGG TATTTTCCGC GGCAGCTAAG ACGTGGGAGC CTCAATTTCG CTTCGGCAAA
ATCAACACTG AAGAACAGCA AGCCCTTGCG GCGCAATTTA ATATTCGCTC GATTCCCACT
CTTATGATTT TCAAGCAAGG GAAAATACTC GCGCAGCAAG CGGGCGCTTT ACCTCAGTCA
GCCTTAAATC AATGGTTAAA AAGCCATAGT TAA
|
|---|
| Protein sequence | MGEIIITQPL NNRPLAQYIS RIDVLFWSFA MIIACPHCDT LNRVPDERVN QQPTCGKCKL
SVFTAATIEL TSANFANHAN KSELPLVVDF WASWCGPCKS FAPVFSAAAK TWEPQFRFGK
INTEEQQALA AQFNIRSIPT LMIFKQGKIL AQQAGALPQS ALNQWLKSHS
|
|---|
| |