| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3828 |
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| Symbol | |
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| ID | 7088863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 4535800 |
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| End bp | 4536756 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 643462707 |
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| Product | TRAP transporter solute receptor, TAXI family |
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| Protein accession | YP_002359728 |
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| Protein GI | 217974977 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATCA AAAAACGTTT TGTTGCCGTC GGCGCTGCCG TGACACTCAC ACTCAGTGCC
GCCGCGATGG CCGCCGCACC CGCTTTTATT AACATACTCA CGGGTGGCAC CAGTGGCGTG
TATTACCCTA TTGGTGTTGC CCTATCGCAA CTCTATGGCA CTGGAATCGA AGGTTCTAAA
ACCTCAGTTC AAGCGACGAA AGCCTCGGTA GAAAACCTCA ATCTACTGCA AGCGGGTCGT
GGCGAATTAG CGCTCGCGCT AGGTGACTCA GTCGCAGCCG CTTACCAAGG TGATATTGAT
GCGGGCTTTA AAACGCCACT GGATAAAATC CGTGTGCTCG CCTCTGCTTA CCCTAACTAC
ATTCAAATTG TTGCCAATAA AGAGTCTGGC ATTAAAACCT TGGCCGATTT AAAAGGGAAA
CGTATCTCTG TCGGCGCACC TAAATCGGGT ACCGAACTCA ATGCCAGATC GATTTTCAAG
GCAGCGGGTT TAAGCTACGA AGATATGGGT AAAGTCGAGT TTTTGCCTTA TGCCGAATCC
GTTGAACTCA TCAAAAATCG TCAGTTAGAC GCGACCTTGC AATCGTCTGG TCTCGGTATG
GCAGCCATCC GCGATTTAGC GGCGACTATG GCAATCAACT TTGTTGAAAT TCCAGAGGAT
GTGATCGCTA AGATTAACAA CCCTGCCTAT CAACACGGCG TGATCCCAGC ATCGACCTAT
GAAGGCCAAA CCACAGACGT TTCAACCGTT GCCATTCAAA ACCTGCTAGT GACGCAAAGT
GGCGTATCGG ATGATTTAGC CTATCAAATG ACTAAGATCA TGTTCGAGCA CTTAGATCGT
CTCGGTAACG CGCACTCAGC CGCTAAATCT ATTAGCTTAG AGAAAGCGAC GAAAAATCTG
CCGATACCGC TTCACCCAGG TGCAGAACGT TATTACAAAG AAGTTGGCGC ACTCTAA
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| Protein sequence | MKIKKRFVAV GAAVTLTLSA AAMAAAPAFI NILTGGTSGV YYPIGVALSQ LYGTGIEGSK
TSVQATKASV ENLNLLQAGR GELALALGDS VAAAYQGDID AGFKTPLDKI RVLASAYPNY
IQIVANKESG IKTLADLKGK RISVGAPKSG TELNARSIFK AAGLSYEDMG KVEFLPYAES
VELIKNRQLD ATLQSSGLGM AAIRDLAATM AINFVEIPED VIAKINNPAY QHGVIPASTY
EGQTTDVSTV AIQNLLVTQS GVSDDLAYQM TKIMFEHLDR LGNAHSAAKS ISLEKATKNL
PIPLHPGAER YYKEVGAL
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