Gene Sbal223_3800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_3800 
Symbol 
ID7088835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp4502644 
End bp4503321 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content53% 
IMG OID643462679 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_002359700 
Protein GI217974949 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.25845e-05 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATATTAA TTACCGGCGC CAGCAGTGGT TTAGGCGCGG CGCTAGCATC ACTCTACGCC 
AAAGAAAATG AACCGCTTAC ACTCACAGGC CGCAATGCCG AGCGTCTACA AACCGTCGCC
AATGCATTAA CGCCCTTCTC CAACAAGCCT ATCGCCGCGA TCACCGCGGA TCTCGCCAGT
GAATCGAGTC TCGAAGCCCT GTTCGATGGC CTGACACAAG CCCCTAAAAC CGTGATCCAC
TGCGCGGGCA GTGGCTACTT TGGTGCGATT GAAACTCAAG GGGCGAGCGA TATCCACAGC
CTGCTCAATA ACAATGTCAC CTCGACGATT CTGTTGGTGC GCGAACTAGT CAAACGCTAT
AAAGATCAAG CGGTCACTGT GGTTGTGGTC ATGTCCACCG CAGCGCTTGC CGCCAAGGCA
GGAGAATCCA CTTACTGCGC GGCAAAATGG GCAGTGCGGG GATTTATCGA GTCGGTGCGA
TTAGAGCTTA AACAAAGCCC AATGAAGTTG ATTGCCGTGT ATCCCGGCGG TATGGACACA
GGCTTTTGGC CAAGTAGTGG TAAAACATTA GATACCTCAA GCTTTATGTC CGCCGATGAA
GCGGCAGGTA TGCTCAAACA AGCCTTGGTT GCCACAGAGC ATGGTTATAT CGCCGATATC
ACCATACAAA GAGCCTAG
 
Protein sequence
MILITGASSG LGAALASLYA KENEPLTLTG RNAERLQTVA NALTPFSNKP IAAITADLAS 
ESSLEALFDG LTQAPKTVIH CAGSGYFGAI ETQGASDIHS LLNNNVTSTI LLVRELVKRY
KDQAVTVVVV MSTAALAAKA GESTYCAAKW AVRGFIESVR LELKQSPMKL IAVYPGGMDT
GFWPSSGKTL DTSSFMSADE AAGMLKQALV ATEHGYIADI TIQRA