Gene Sbal223_3766 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_3766 
Symbol 
ID7087430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp4467706 
End bp4469859 
Gene Length2154 bp 
Protein Length717 aa 
Translation table11 
GC content45% 
IMG OID643462646 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_002359667 
Protein GI217974916 
COG category[T] Signal transduction mechanisms 
COG ID[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAAGG ATGAGTTTTC TAAATCGCAT AGCCCATCAA ATAATATCTA CTTTAGCGTG 
CTGAGCTCTA GCTGGCTGAT GATTGTCGCT GCTTTACTTT TTATGGGCAT CTCTTGGTAT
GTGCTGGAGC AATATCTTAG AGATAGGGGT GAAGAGCGTT TCGAGAACAG TGTTCAAGAG
TTAACTGAAG CGGTGAATCG CAGAATGCTT GCCTACGAGC AAGTCTTACG CGGTGGTGTC
GGCTTGTTAT TGTCCTCCAA TAGTGTGACC CGCAAGGAAT GGCAAACCTA TGTTGTCAAT
GCACATTTAT CTGAGTATTA CCCGGGTTTC CAAGGCTTTG GCTATGCTCA GTTACTTAAA
CCTGACACAT TAGATACCCA CGTCCAACAA GTTCAAGCCG AAGGCTTTAA AGACTATAAA
ATTTACCCTG AAGGAGTTCG TGATCAGTAT TGCGTGATCT TGTATTTAGA GCCTTTTGAT
TGGCGCAATC AAAGAGCCTT TGGCTATGAC ATGTGCTCCG AGGCTAATCG TCGCAAAGCC
ATAGATCACG CCATTACCAC TGGTCAGCCA ACTATCTCTG GCAAGGTCGC CTTAGTGCAA
GATACACCCG AAGATGCTAA AGCAGGTTTT TTGATGTATT TGCCAATTTA TCAAGGGATT
GTGGCAACGG AGGCTGAACG GAAACAGCAG GCGATTGGAC TCGTGTATGC GGCGTTTAGG
ATGGACGACC TCATGCAAGG AATTATGGGG GATCGATTCT CAGGTTTGAA GCTCGCCATT
TATGAAAACC CACAGGCAAG TGTTGACAGT TTAATGTTTA CTAGCAGTAA AGTACTGCCA
AATCAAAAAG ATGTGTTCTA TCAGTCACAG ACCGACTTAA TTGGCGGTAA GCAGTGGCGC
TTGGACATTT CATCACAATC GCGTTTTATC TCAAGATCGG AAGAGACCCA AGGTATCTGG
CTGCAATTTA TCGGTTGTGC ATTCATTTTG GCGTTGTTTT ATTCTGTGCT AATCATGGCG
CGTAATCGAT ATAAAGAGTC ATTGCTTACC TCTGAGCTAA TCGCGAATGA AAAACGCTTT
AGACTCGTCA TTGAAGCCTC TCCAAGCGCA CTATTTATGG TCGATAAGGC AGGGGTTATT
ACGTTAGTGA ACACCCATGC CGAACGCTTA TTTGGTTATG CCAGAGACGA GTTACTCGGC
CGCTCTATCA ATATGTTATT GCCAGACGCG CTGAGGGATG CGCATCAGCA GCACATGAAT
AATTACTTAG TGCAGCCCAT TGCGAAAAAT ATGTCGATGC GGGATGACTT ATTTGGCTGT
TGTAAAGATG GCAGTCGACT CGCGATAGAA GTGGGGCTGA CACCTATTCA TTTCAGTAAT
GGCATTTTCA TTCTCGCGAC GATTAACAAT GTGTCTGAAC GTAAGCGCAT TGAAGTCCAG
CGTGCAGAAC ACATGCAAGA GCTTGAGCGG ATTAATCAAG AACTCGACCG CTTTGCCTAT
ATCGCCTCCC ATGATTTGAA ATCTCCACTA CGGGGTATCG AGCAGTTAAC ATCTTGGTTA
GCAGAGGATT TATCCGATAA CACCAATGAA AACGTGCAGA AATATCTCGG GCTGATCCAA
AGTCGTATTC ATCGCATGGT GTTATTGCTC GATGGGCTAT TGATGTTTTC CCGTATTGGC
CGTGTCGATA CTGAAACCAC CGAGGTCAAC AGTCGGCAAC TGGCTGAAGA CATGTTTGCG
CTCGTCGCGC CGCCACAGGG GTTTGAATTA GTTCTAAAAG GGGAGTTTCC AAATTTCCAT
ACTGTACGCG CACTGTTGGA ATTGGTGATA CGAAATTTAA TCAGCAATGC CATTAAACAC
CATGACTTAG GCACAGGTGT GATCACTGTC TTATGTGAGG CCGCGGATAA ACATTATCTC
TTCAGTGTGA TAGACGATGG CCCAGGTATC TCAAGTGCCT ATCAGAATAA AGTCTTCGAA
ATGTTTCAAA CACTTAAGCC TAGGGATGAA GTCGAAGGCA GTGGTTTAGG GTTATCACTT
GTGAAGAAAA CAGTTGAAAG TTTAGGTGGG AATATTCAAC TCAAATCGCA GGGCAGAGGC
TGTTGTTTTT ACTTTACTTG GCCTAAGAAA ATAGTGAAAA AGGAGCTTCT ATGA
 
Protein sequence
MDKDEFSKSH SPSNNIYFSV LSSSWLMIVA ALLFMGISWY VLEQYLRDRG EERFENSVQE 
LTEAVNRRML AYEQVLRGGV GLLLSSNSVT RKEWQTYVVN AHLSEYYPGF QGFGYAQLLK
PDTLDTHVQQ VQAEGFKDYK IYPEGVRDQY CVILYLEPFD WRNQRAFGYD MCSEANRRKA
IDHAITTGQP TISGKVALVQ DTPEDAKAGF LMYLPIYQGI VATEAERKQQ AIGLVYAAFR
MDDLMQGIMG DRFSGLKLAI YENPQASVDS LMFTSSKVLP NQKDVFYQSQ TDLIGGKQWR
LDISSQSRFI SRSEETQGIW LQFIGCAFIL ALFYSVLIMA RNRYKESLLT SELIANEKRF
RLVIEASPSA LFMVDKAGVI TLVNTHAERL FGYARDELLG RSINMLLPDA LRDAHQQHMN
NYLVQPIAKN MSMRDDLFGC CKDGSRLAIE VGLTPIHFSN GIFILATINN VSERKRIEVQ
RAEHMQELER INQELDRFAY IASHDLKSPL RGIEQLTSWL AEDLSDNTNE NVQKYLGLIQ
SRIHRMVLLL DGLLMFSRIG RVDTETTEVN SRQLAEDMFA LVAPPQGFEL VLKGEFPNFH
TVRALLELVI RNLISNAIKH HDLGTGVITV LCEAADKHYL FSVIDDGPGI SSAYQNKVFE
MFQTLKPRDE VEGSGLGLSL VKKTVESLGG NIQLKSQGRG CCFYFTWPKK IVKKELL