Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_3733 |
Symbol | |
ID | 7087397 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 4435938 |
End bp | 4438844 |
Gene Length | 2907 bp |
Protein Length | 968 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643462613 |
Product | ATP-dependent helicase HepA |
Protein accession | YP_002359634 |
Protein GI | 217974883 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGTTCG CCTTAGGTCA ACGTTGGATA AGTGATACCG AGTCAGAGCT TGGTTTAGGA ACTGTGGTTC AAGTAGAAGG CCGTATGGTC ACTGTTTTAT TCCCTGCCAC GGGTGAGAAT CGCATGTTCT CCCGAGCAGA AGCCCCTCTG ACACGCGTTA TATACAATCC CGGCGATTCG GTTGAAAGCC ATGAAGGCTG GAGCCTTGCG GTCAGTGAAT TGACCGAGAA AGACGGGATA GTGATCTATC ACGGCATTCA CAGTGAGACA GGCGAGCAAG TTACCCTGCG TGAAACCCTG CTGAACCACA ATATTCGTTT CAATAAACCC CAAGACCGTT TATTCGCCGG CCAAATCGAT CGCCTCGACC GTTTTGGTGT GCGTTATCAG TGCCAAATGT TGCGCCACAA ACTGGCCTCA TCGGATTTGC TTGGTCTGCA AGGTCCACGC GTTGGACTTA TTCCGCATCA AATGTGGATT GCCCATGAAG TCGGTCGTCG CTATGCACCG CGTGTACTGT TAGCCGATGA AGTGGGTTTA GGTAAAACCA TTGAAGCGGG TCTGATTATT CACCAACAAC TGCTGACTGG CCGCGCCGAA CGCATCCTGA TTATCGTGCC CGATACTTTG CGCCATCAGT GGTTAGTGGA AATGCTGCGC CGCTTTAACC TGCGCTTCTC AGTATTTGAT GAAGATCGTT GTGTAGAAGC CTATGCCGAT CACGACAATC CTTTCTACAC AGAACAATTA GTGATTTGTT CACTCGAATT ACTGCGTAAG AAAAAACGTC TAGATCAAGC CCTAGATGCC GATTGGGATC TGTTAGTGGT TGACGAAGCA CACCACTTAG AATGGACCGA AGAAGCACCA AGCCGCGCTT ATCAAGTGGT TGAAGCATTA AGCGAAGTCA TCCCAGGCGT TTTACTGTTA ACCGCAACGC CGGATCAACT TGGCCATGAA AGTCACTTCG CCCGTTTGCG TCTGCTCGAT CCGGATCGTT TCTACGATTA CGATGCCTTC CTAGCCGAAG AAGACAGCTA TAAAGACGTC GCCATTGCCG CTGAAGCGCT AGCTGGCAAC GCTAAATTAC CCGATGCCGC CATCAACAGC TTGACCGAAT TACTGGGCGA AAAAGACATC AGCCCAAGTA TTCGTTTAAT CCAAGCCGAC GGCATTGATG CTGAAGTACA GCAAGCCGCC CGCAGCGAAT TACTGCAAGA ATTACTCGAC CGTCACGGTA CTGGCCGCGT CTTATACCGC AACAGCCGCG CCTCAGTAAA AGGCTTCCCT AAGCGTTTCT TTAACGCTTA CCCACACGCC ATGCCAGATC AATATCAAAC AGCCGCACGC GTCAGCGGCA TGATGGGCGG ACACAAGTCA TTAGAGGCGA AAGCGGCGCA AGCCCTGAGC CCTGAAAAGC TGTATCAAGA ATTTGAAGAT AACAGCGCCA GTTGGTGGAA GTTTGATCCC CGTGTGGATT GGTTAATTGA GTTCTTAAAA TCACACCGCA GCAAAAAAGT GCTGATCATC GCCAGCCAAG CGGAAACCGC CCTGAGCTTA GAAGAAGCCC TGCGCACCCG CGAAGGGATT CAAGCGACGG TATTCCACGA AGGCATGTCG ATTATCGAGC GCGATAAAGC TGGCGCTTAC TTTGCTCAAG AGGAAGGCGG CGCACAGGCG TTGATCTGTT CTGAAATTGG TTCTGAAGGC CGTAACTTCC AGTTTGCCAG TCACTTAGTC CTGTTCGATC TGCCGCTAAA CCCAGATCTA TTGGAACAGC GCATCGGTCG TTTAGACCGT ATCGGCCAGA AAAATGATAT CCAAATTCAC TTACCGTACC TTGAAGACAC CGCCCAAGAA CGTTTGATGC AGTGGTATCA CCAAGGGCTG AATGCCTTCG AACTGACTTG TCCGAGTGGC CATGTGCTTT ACAGTGAATT TGCCGAAGAT CTGTTAAACG TGCTTGTGGT TGATGACAGC GACGAGCTGA CAAACCTGCT CAATCACACC CAGAGCCGTT ATAAAGAACT CAAGCACGCC ATGGAGCAAG GCCGCGACAA GCTGCTGGAA ATCAACTCAC ACGGCGGCGA GAAGGCAATG GCTATCGTCC AGCGCCTCGC CCAGAATGAT GGTGATACCC ATTTGATCGG TTCAGTGATC CGTCTGTGGG ATATTATCGG TGTCGATCAA GAAGATAAGG GTGAAAACTC GATCATTCTG CGCCCGAGTG AACACATGAT GTTCCCAACC TACCCTGGCT TGCCAGAAGA TGGCGTGACT GTGACCTTCG ACCGTGACAC AGCGTTATCT CGCGATGATA TTGCGCTGAT CACCCAAGAG CATCCACTGG TGCAAACGGG GCTAGATCTG ATCACAGGTT CAGAAACCGG CACCACCAGC GTCGCAATTC TGAAGAATAA AGCCCTGCCT GCAGGTACCT TATTCTTAGA ACTCATCTAC ATGGCCGATG CTTCTGCACC TAAGTCGAGC CAGTTGTATC GTTATTTACC ACCTACACCC ATTCGCGTGT TGCTGGATAA AAACGGTAAC GACCTGTCGG CTAAAGTGGA TTACGCCAGT TTCGATAAGC AATTGAGCGC GGTGAATCGT CACATTGGCG GCAAGTTAGT CACCGCATCT CAGCCAATTC TGCATCCGTT ATTTGCTAAG GGTGAGGAAT ATGCTCAAGT GGTTGTCGAT GAAATGGTCG CCCAAGCCAG AGAGAAAATG ACTCAGCAAC TGAGCGCTGA GCTGAGTCGT TTAGAGTCAC TTAAGGCGGT AAACCCCAAT ATCCGTGAGG AAGAATTGGA ATACCTGCGC AATCAGATGC AAGAGTTAAA CACTTATCTG GATGCCAGCC AGTTACAACT CGATGCGATC CGTATGGTGC TCGTCAGCCA CGTATAG
|
Protein sequence | MPFALGQRWI SDTESELGLG TVVQVEGRMV TVLFPATGEN RMFSRAEAPL TRVIYNPGDS VESHEGWSLA VSELTEKDGI VIYHGIHSET GEQVTLRETL LNHNIRFNKP QDRLFAGQID RLDRFGVRYQ CQMLRHKLAS SDLLGLQGPR VGLIPHQMWI AHEVGRRYAP RVLLADEVGL GKTIEAGLII HQQLLTGRAE RILIIVPDTL RHQWLVEMLR RFNLRFSVFD EDRCVEAYAD HDNPFYTEQL VICSLELLRK KKRLDQALDA DWDLLVVDEA HHLEWTEEAP SRAYQVVEAL SEVIPGVLLL TATPDQLGHE SHFARLRLLD PDRFYDYDAF LAEEDSYKDV AIAAEALAGN AKLPDAAINS LTELLGEKDI SPSIRLIQAD GIDAEVQQAA RSELLQELLD RHGTGRVLYR NSRASVKGFP KRFFNAYPHA MPDQYQTAAR VSGMMGGHKS LEAKAAQALS PEKLYQEFED NSASWWKFDP RVDWLIEFLK SHRSKKVLII ASQAETALSL EEALRTREGI QATVFHEGMS IIERDKAGAY FAQEEGGAQA LICSEIGSEG RNFQFASHLV LFDLPLNPDL LEQRIGRLDR IGQKNDIQIH LPYLEDTAQE RLMQWYHQGL NAFELTCPSG HVLYSEFAED LLNVLVVDDS DELTNLLNHT QSRYKELKHA MEQGRDKLLE INSHGGEKAM AIVQRLAQND GDTHLIGSVI RLWDIIGVDQ EDKGENSIIL RPSEHMMFPT YPGLPEDGVT VTFDRDTALS RDDIALITQE HPLVQTGLDL ITGSETGTTS VAILKNKALP AGTLFLELIY MADASAPKSS QLYRYLPPTP IRVLLDKNGN DLSAKVDYAS FDKQLSAVNR HIGGKLVTAS QPILHPLFAK GEEYAQVVVD EMVAQAREKM TQQLSAELSR LESLKAVNPN IREEELEYLR NQMQELNTYL DASQLQLDAI RMVLVSHV
|
| |