Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_3719 |
Symbol | psd |
ID | 7089653 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 4414883 |
End bp | 4415761 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 643462599 |
Product | phosphatidylserine decarboxylase |
Protein accession | YP_002359620 |
Protein GI | 217974869 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0688] Phosphatidylserine decarboxylase |
TIGRFAM ID | [TIGR00163] phosphatidylserine decarboxylase precursor |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGATAAAG TCAAAATTGC GCTGCAGTAC ATGCTGCCGA AACACTTATT ATCTCGTTTA GTGGGTAAAC TCGCCGCCGC CGAAGCGGGC GCGTTAACCA CGGCCGCTAT CAAGTGGTTT ATCAAGCAAT ATAAAATTGA TATGAGCGAA GCGGCGCAGA GTGAGCCTGA AGCCTATAAA AGCTTTAATG CCTTTTTTAC CCGCGCCCTT AAACCCGGTA TTCGTCCGTT AGATATGGAC GCCGATATCA TGGTGCATCC AGTCGATGGC GCCGTAAGCC AATTAGGCCC GATTAAAAAC GGCCGCATCT TCCAAGCTAA GGGTCACCAC TATTCATCCT TAACCTTGCT TGGCGATCAA GCTGAAGATG CTAAACGCTT CGAGGGCGGT GATTTTGCGA CTATCTATCT GGCGCCTAAA GACTATCACC GTATCCACAT GCCGATTAAA GGCACGTTAT CAAAAATGAC TTACGTACCT GGTGAACTGT TTTCGGTTAA TCCGTTAACG GCCAGAAACG TACCCGGTCT CTTTGCCCGC AACGAACGTG TGGTGGCGAT TTTCGAAACC GAATTAGGTC CATTAGCCAT GGTATTGGTT GGCGCAACGA TTGTTGCCAG TATCGAAACA GTCTGGGCAG GCACAGTCAC GCCGCCGACA GGTAAGCAAG TCTTCACTTG GGAATATCCA ACCCAAGGCC CCGATGCCAT CACCTTAGAC AAAGGTGAAG AAATGGGTCG CTTCAAGTTA GGCAGTACTG TGGTGATGTT GTTTGCTAAA GATGCTATCG CGACCTTTGC TGAAGGTGTC GAAGCCGAAG CTGTAACGCG TATGGGACAA GCCTTCGCTA ACCTGAAAGA CGTTAAGCAA GCGGATTAA
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Protein sequence | MDKVKIALQY MLPKHLLSRL VGKLAAAEAG ALTTAAIKWF IKQYKIDMSE AAQSEPEAYK SFNAFFTRAL KPGIRPLDMD ADIMVHPVDG AVSQLGPIKN GRIFQAKGHH YSSLTLLGDQ AEDAKRFEGG DFATIYLAPK DYHRIHMPIK GTLSKMTYVP GELFSVNPLT ARNVPGLFAR NERVVAIFET ELGPLAMVLV GATIVASIET VWAGTVTPPT GKQVFTWEYP TQGPDAITLD KGEEMGRFKL GSTVVMLFAK DAIATFAEGV EAEAVTRMGQ AFANLKDVKQ AD
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