Gene Sbal223_3717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_3717 
Symbol 
ID7089651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp4413098 
End bp4413643 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content45% 
IMG OID643462597 
Productoligoribonuclease 
Protein accessionYP_002359618 
Protein GI217974867 
COG category[A] RNA processing and modification 
COG ID[COG1949] Oligoribonuclease (3'->5' exoribonuclease) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.624227 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCAG ATGTAAATAA TCTCATTTGG ATCGATTTGG AAATGACAGG GTTAGAGCCC 
GACGTCGACA GGATCATTGA AATTGCCACT TTAGTGACAG ATCAAGAACT CAATATTATC
GGTCAAGGTC CGGTTATCGC GATTCATCAA TCGGATGACG TGCTGGCCGC TATGGATGAT
TGGAATCAAA AACACCATGG TGAGTCAGGG TTGATTGACC GCGTTCGTGC TAGCCAAGAA
ACCGAAGCGC AAGCCGTGGC TAAGACGATT GCCTTCTTAG AACAGTATGT TCCTAAGGGC
GCTTCTCCAA TGTGTGGTAA TAGTATTGGG CAAGATAGAC GCTTCTTAAA TCGTTATATG
CGCGAGCTGG AAGATTATTT CCACTACCGC AATGTGGATG TCAGTACGAT TAAAGAGCTA
GTGAAGCGTT GGAGCCCAGA AACTATGGTA GGCTTTAAGA AGCAAAACAC TCACCAAGCA
CTGCAGGATA TCCAAGAGTC GATCGCTGAA TTGCAGTATT ATCGCAGCAA AGTATTTAAA
ATTTGA
 
Protein sequence
MTADVNNLIW IDLEMTGLEP DVDRIIEIAT LVTDQELNII GQGPVIAIHQ SDDVLAAMDD 
WNQKHHGESG LIDRVRASQE TEAQAVAKTI AFLEQYVPKG ASPMCGNSIG QDRRFLNRYM
RELEDYFHYR NVDVSTIKEL VKRWSPETMV GFKKQNTHQA LQDIQESIAE LQYYRSKVFK
I