| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3713 |
|---|
| Symbol | |
|---|
| ID | 7089647 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 4407472 |
|---|
| End bp | 4408893 |
|---|
| Gene Length | 1422 bp |
|---|
| Protein Length | 473 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 643462593 |
|---|
| Product | N-acetylmuramoyl-L-alanine amidase |
|---|
| Protein accession | YP_002359614 |
|---|
| Protein GI | 217974863 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.000484801 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAAAAA ATAACCCTTA TTTTCAAATT ATTATTCTTT CTTTATGTTC TTTTTTATCT
GTGGCGGCCC ATGCGGCTAA TCAGTTAGAA AGCGTACGTA TTTGGGCTGC GCCTGAGTCG
ACTCGAATCG TGTTTGATTT AAGTGAAGCG CCAGATTACA CCTATTTCTC TTTAGATGGC
CCTAATCGCT TAGTGGTGGA TTTAAAAAAG TCCGCCACTA AAGTTGCGCT TAAAAATCTT
GAAAACAATA GTAAGTTAGT CAAGGGCGTG CGAGTCAGTA AGTCGCCGAC TAAGGGCGAT
TTACGCTTAG TAATCGATTT GGTGAAGCCA CTGAATGCGA GTTTGTTTTC GTTGCCCGTA
ACTGCGCCCT ACGGCAATCG TCTCGTGGTT GATTTAGAAG ATAAAACCTT AACAACCGCC
ACCGCAGTTG TCTCATCCAC ACCCGTTAAA ACCGTTACCC AAGCGGCGCA ATCATCCCGC
GATATCGTGA TTGCTATCGA TGCGGGTCAT GGCGGCGACG ACCCCGGCTC CATTGGCCCT
TCTGGCGTTT ACGAAAAAAA GGTTGCCCTA GAAATCGCCA GACGTGTTTC GAGTAAAATC
AATGACACGC CCGGCATGCG CGCTGTGATG ATCCGCACCG GCGATTATTT TGTGAATTTG
AATAAGCGCT CTGAGTTGGC CCGTAACAGT AAGGCCGATC TGCTGATTTC TATCCATGCC
GATGCTTTTA CTTCCCCGAA TCCGCGCGGC GCCTCTGTGT GGGTATTATC CATGCGTCGG
GCTAACAGTG AAATTGGCCG TTGGTTAGAG CAAAAAGAAA AGCATTCTGA GCTACTTGGC
GGCGCGGGTG AGATTATCCA AAACACGGAT AATGAACAGT ATTTAGCCAT GACGTTGCTC
GATATGTCGA TGAACAGTTC GATGGCCATT GGTCATTCAG TCGCTGGCGA TATTCTTAAG
GATTTAGGCG GCGTGACTGA TTTACACAAG AGTCGCCCCG AGTCGGCGAG TTTAGCTGTG
CTGAAATCAC CGGATATTCC TTCAATCTTG GTAGAAACGG GTTTTATTTC GAATCCGAAA
GAAGAGCGTT TGCTGTCGAG CAGTCGTCAT CAAGAAAACA TCGCTAATGC TATCTATAAG
GGTGTGAGTC GTTACTATCA CAATAATCCG CCAGCGGATA CCTTGCTTGC CCAGCGAGGC
GGCGCAAGCT CTAGCAGTGC TAAATCGACT AAAGAGAGAA CGCCAACCGC TTATGTTGGG
AGTTCAACGG CATCGAACGT CAAACATAAA GTCAGTCGTG GCGAGTCTTT ATCGGCCATC
GCGCAGCGTT ACCGTGTGCC TATGTCTAGC ATCAAACAAG CGAATGGGAT GAAGTCCGAT
GTGGTGCAGT TAGGGCAAAC GTTAGTTATA CCCCAGAGTT AA
|
|---|
| Protein sequence | MIKNNPYFQI IILSLCSFLS VAAHAANQLE SVRIWAAPES TRIVFDLSEA PDYTYFSLDG
PNRLVVDLKK SATKVALKNL ENNSKLVKGV RVSKSPTKGD LRLVIDLVKP LNASLFSLPV
TAPYGNRLVV DLEDKTLTTA TAVVSSTPVK TVTQAAQSSR DIVIAIDAGH GGDDPGSIGP
SGVYEKKVAL EIARRVSSKI NDTPGMRAVM IRTGDYFVNL NKRSELARNS KADLLISIHA
DAFTSPNPRG ASVWVLSMRR ANSEIGRWLE QKEKHSELLG GAGEIIQNTD NEQYLAMTLL
DMSMNSSMAI GHSVAGDILK DLGGVTDLHK SRPESASLAV LKSPDIPSIL VETGFISNPK
EERLLSSSRH QENIANAIYK GVSRYYHNNP PADTLLAQRG GASSSSAKST KERTPTAYVG
SSTASNVKHK VSRGESLSAI AQRYRVPMSS IKQANGMKSD VVQLGQTLVI PQS
|
|---|
| |