| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3686 |
|---|
| Symbol | |
|---|
| ID | 7089620 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 4375777 |
|---|
| End bp | 4378347 |
|---|
| Gene Length | 2571 bp |
|---|
| Protein Length | 856 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 643462566 |
|---|
| Product | ATP-dependent helicase HrpB |
|---|
| Protein accession | YP_002359587 |
|---|
| Protein GI | 217974836 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1643] HrpA-like helicases |
|---|
| TIGRFAM ID | [TIGR01970] ATP-dependent helicase HrpB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTGGCCG CTGATGTCTT TTTCTTGAAC TCTCTACCTA TTCATAGCTT ATTAGCACCG
CTGCGTGCGG CTTTTTCTCG TCACGCTCAA GTGATCCTCG AGGCACCGAC AGGTGCGGGT
AAATCTACCG CATTACCTTT GGCTATGTTG GATTGGCCAG AAATCAGCGG ACGCATTTTA
ATGCTCGAAC CGCGGCGTGT CGCTGCGCGC AGTGTGGCGC ACTATATTGC CCATTGTCGC
CAGCAAAAGG TGGGGCAAGA AGTGGGCTAT CGCGTGCGCG GTGAAGCTAA AGTCAGCGCC
AATACCCGCT TAGAGATTGT CACCGAAGGC ATACTCACGC GGATGATCCA GCAAGATCCC
GAATTAACTG GGATTGGAAT GATCATCTTC GATGAGATCC ATGAACGCCA CCTCACTACC
GATTTAGGCC TTGCCTTAGC GCTCGAAGTG CAAGCCTCAC TGCGGGACGA TTTAAAGATA
TTGGCCATGT CGGCAACCTT ATCTGGCCTT GCATTAGGCG AACTGATGCC AGAGGCCGTG
ACCTTGCACA GTGAAGGCCG CAGTTTTCCC GTTGAGGTTG AATATCGCCC TGTGCCGACG
CAGCAGCATT GGATCGATCA TCTTGGCCGC TGCGTACTTG ATCTGGTCTC TGCCAGTAGT
GCCAACGTTG ATAAAACGGC TAGCAATAAC GCCGTGCTCG TCTTCTTACC GGGAAAAGGC
GAAATCTCAC GACTGCAGCA GTTTCTGCGT GAGCGCTTAG CCCAAGATGC CTTTCTGATT
TGCCCCCTTT ATGGTGAGCT TTCGGGTGCT GAGCAAGATA GCGCGATTGC GGCAACCACA
GATGGCAGGC GCAAAATCGT GCTAGCGACT AACGTGGCGG AATCGAGCTT AACCATTGAA
GGTATAGGTT TTGTCATCGA CAGCGGCTAT AAACGTCAGG CCAGTTTTAA CCCTAAAACC
GGCGTCACCC GCTTAGGTTT GAAACGCATT AGCCAAGCTT CGGCAACTCA GCGCAGTGGC
CGCGCCGGAC GTTTATCTGC GGGCGTGTGC GTGCGTTTGT GGAGCCAAGA AGAACATGGC
CGTATGCTCA GAGCCGATGA ACCCGAGATC AGCCAAGCGG ATCTGGTGGC TATGGCCCAC
GATTGTGCTT ACTGGGGCGC AAAATCCTTC AGCGACTTGA TGTTGTTAAC GCCGCCACCG
AGTGTTAATG ATGCGCTGGC GTGGCAATTA CTGCAGCGCT TAGGCATGGT CGATGGTGAC
AATAAACTCA CTTCCCACGG TAAAGCGGCC TATGAGCTGG GGTGTCACCC CAGGCTTGCC
CATATGCTAT TGGGCGCGAA AAGCTTAAGT GTGAAAAGCT TAGGCGTAAA CAATGTTAAT
GAGCAAACTG GGCAATTGGG CAGTTTGGCC TGTTTGCTGT CGGGGATTGT AGAGGCGCGC
GGTTTGCCTA AAAAGGGCGC CGATATCATG AATTACCTGC ACTTTGCCTG TCAGGGGCAA
GCGGGACAGC AGGCGAAACA GTGGCAGAAA AAGCTCGGTT TAACTGCCGA CTTAGCGAAG
GTCGCGACCC ATGCTCACCA CAGTGATGTG GGATTATTGC TGGCGTTGGC GTATCCAGAT
CGCATTGCCA AAGCGCGCGG TGTTGAGGGC TATCAATTAG CCAATGGTAC TGGCGTGGTG
TTGGCGGCCG AAGATGCCTT GTCGCAAACG CCTTGGATGG TGGTGGCGGA TTTCCAAGAA
ACTGAAGGCC GAAACGCCGG GCGGATTTAC TTGGCGAGCC AGTTTCAGCC GAGCTTATTC
GATAGCGAGC TAAAAGACTT GCTGGAAATC CACGAGATCT GTGGCTGGGA TGAAGGCAAA
GGCCGAGTCA TTGCCGAGCG CCAATATAAG GTCGGACAAA TTTTAGTGAA AACCGAGACG
ATTGCTAAGC CTGAGCGCAA GCAAATTGTC GCGGCCTTAC TGGGTTATAT TCGCCAGCAA
GGATTACAAA TTCTCAATTG GAACGCTAAC TTAGAGCAGT TTCAATACAG GCTCAAACTC
GCGACTGAGT TCGACGCGGG CAGCGACTGG CCCAAGGTCG ATGATGGGGC GTTATTAGCG
TGCCTAGAAA CTTGGCTGGC GCCTTACCTC GAAAATGTGA ATAATCTGCC GCAATTAGTT
AAGCTCGATT GTTTTAGTTT TGTGGCAAAC TGTTTGAGCT GGCAGCAGAA ACAGCGACTG
GACGAGTTAT TGCCAACCTC TTGGCCGTTA GTCACCGGTA CCTCTGCGCC AATCGTATAC
GATGAGTCTG GGCGTGCGCT GCTGCGGGTG CGACTGCAAG AAACCTTTGG CATGGCGCAG
AGTCCTATGT TGGCGCAGGA CAAGCTAAAG GTGACGATGG AATTACTTTC TCCCGCTCAG
CGTCCATTGG CTTTGACGGC GGATTTAGCC AGTTTCTGGC AGGGACCTTA TGTTGAAGTG
AAAAAGGAAA TGCGCGGCCG ATACCCAAAA CATCTGTGGC CGGACGATCC TGTTAATACA
CTACCGACAA AATTTACCAA GAAGAAAACC TTGGGTTTAG CTCAGCCATA G
|
|---|
| Protein sequence | MLAADVFFLN SLPIHSLLAP LRAAFSRHAQ VILEAPTGAG KSTALPLAML DWPEISGRIL
MLEPRRVAAR SVAHYIAHCR QQKVGQEVGY RVRGEAKVSA NTRLEIVTEG ILTRMIQQDP
ELTGIGMIIF DEIHERHLTT DLGLALALEV QASLRDDLKI LAMSATLSGL ALGELMPEAV
TLHSEGRSFP VEVEYRPVPT QQHWIDHLGR CVLDLVSASS ANVDKTASNN AVLVFLPGKG
EISRLQQFLR ERLAQDAFLI CPLYGELSGA EQDSAIAATT DGRRKIVLAT NVAESSLTIE
GIGFVIDSGY KRQASFNPKT GVTRLGLKRI SQASATQRSG RAGRLSAGVC VRLWSQEEHG
RMLRADEPEI SQADLVAMAH DCAYWGAKSF SDLMLLTPPP SVNDALAWQL LQRLGMVDGD
NKLTSHGKAA YELGCHPRLA HMLLGAKSLS VKSLGVNNVN EQTGQLGSLA CLLSGIVEAR
GLPKKGADIM NYLHFACQGQ AGQQAKQWQK KLGLTADLAK VATHAHHSDV GLLLALAYPD
RIAKARGVEG YQLANGTGVV LAAEDALSQT PWMVVADFQE TEGRNAGRIY LASQFQPSLF
DSELKDLLEI HEICGWDEGK GRVIAERQYK VGQILVKTET IAKPERKQIV AALLGYIRQQ
GLQILNWNAN LEQFQYRLKL ATEFDAGSDW PKVDDGALLA CLETWLAPYL ENVNNLPQLV
KLDCFSFVAN CLSWQQKQRL DELLPTSWPL VTGTSAPIVY DESGRALLRV RLQETFGMAQ
SPMLAQDKLK VTMELLSPAQ RPLALTADLA SFWQGPYVEV KKEMRGRYPK HLWPDDPVNT
LPTKFTKKKT LGLAQP
|
|---|
| |