Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_3566 |
Symbol | |
ID | 7088681 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 4230927 |
End bp | 4232615 |
Gene Length | 1689 bp |
Protein Length | 562 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643462450 |
Product | malate dehydrogenase |
Protein accession | YP_002359471 |
Protein GI | 217974720 |
COG category | [C] Energy production and conversion |
COG ID | [COG0281] Malic enzyme |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGATA ATAAACGCCC CCTCTATCTT CCGTTTGCAG GACCTGCCAT TCTTGAAGCC CCGCTGATTA ACAAGGGCAG TGCATTTTCT GAAGAAGAGC GTATTTTCTT TAACCTCGAA GGCTTAGTTC CCTATGCCAT TGAAACAATT GAGGAGCAGG CTTCCCGCGC CTACGATCAA TTTAGAAGTT TCAACAACGA CTTAGACAAG CATATTTACC TACGTAATAT CCAAGACACT AACGAGACCT TATTTTATCG TTTAGTGCAA AATAATATCA GCGAGATGAT GCCTATCATC TATACGCCGA CGGTAGGTTT GGCTTGTGAA CGTTTCTCGA AAAACTATCG CCGCAACCGT GGTTTGTTTA TCTCTTATCC GAACAAAGAT AGGATCGATG ACATTCTCAA TAACTCGACT CGCCAAAAAG TTAAAATCAT CGTTGTTACC GACGGTGAAC GTATTTTAGG TCTTGGCGAT CAAGGTATTG GCGGCATGGG GATCCCTATC GGTAAGTTGT CACTCTACAC AAGCTGTGGT GGCATCAGTC CGGCTTATAC TCTGCCTATT ACATTAGACG TAGGCACAGA TAATCCGCAG TTGTTAGAAG ATCCTATGTA TATGGGCTGG CGCCATCCGC GCATCGGTGG CGAAGAATAC GCCGAGTTTA TCGAAGCCTT TATGCAAGCT GTACATGTGC GTTGGCCAGA CACTTTGATC CAATTCGAAG ACTTTGCCCA AAAGAACGCC ATGCCGATCT TAGAGCGTTA TAAAGATCGC TATTGCTGCT TTAACGATGA TATTCAAGGT ACCGCTGCCG TTGCCGTCGG TTCATTGCTG GCCGCTTGTA AAGCTGCAGG TACTGAATTA AATCAACAAC GCATTGCCTT CCTTGGTGCG GGTAGCGCGG GTTGCGGTAT CGCCGAAGCT ATCGTGGCGC AAATGGTGTC CGAAGGGATC AGCGACGAGC AAGCTCGCAC TCAAGTGTGC ATGGTTGACC GTTGGGGCTT ATTGTTAGAC AACATGCCTA ACCTGTTGCC ATTCCAGCAA AAATTGGCGC AGAAATGCAC CAATATCCAA AACTGGAGTA ATTTCAGCGA CAATATTTCG CTATTGGATG TGGTTAACAA CACTAAACCG ACTGTGCTGA TTGGCGTGTC TGGCGTACCA GGTCTATTCA CCGAAGAAAT TATTCGCGCT ATGCACAGCC ATTGTGCCCG CCCGATTATT TTCCCGCTGT CAAATCCAAC CAGCCGCGTT GAAGCAACGC CAAAAGACAT TTTGCATTGG ACTTCAGGTC AAGCATTAGT CGCCACGGGT AGCCCGTTCG AGCCAGTTGT GGTTGATGGT GAAACCTTTG AGATTGCCCA ATGTAATAAC AGCTTTATCT TCCCTGGTAT TGGCTTAGGC GTTTTAGCCT CTGGTGCCCG CCACGTTTCC GATGCCATGT TAATGGCTTC TAGCCGCGCA CTCGCGGAAT GCTCACCACT GGCGATCGAC GGTAGCGGCC CATTATTGCC GAAACTCGAA GATATCCACG CGGTCAGTAA ACACATCGCC TTCGCTGTGG GTAAAGTTGC AGTTGAACAA GGGTTAACAC TGCCAATGAG CGATGAAATC TTACAACAGT CAATTGAAGG CAATTTCTGG AGCCCAGAAT ATCGCCGCTA CAAACGCACT TCGTTCTAA
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Protein sequence | MDDNKRPLYL PFAGPAILEA PLINKGSAFS EEERIFFNLE GLVPYAIETI EEQASRAYDQ FRSFNNDLDK HIYLRNIQDT NETLFYRLVQ NNISEMMPII YTPTVGLACE RFSKNYRRNR GLFISYPNKD RIDDILNNST RQKVKIIVVT DGERILGLGD QGIGGMGIPI GKLSLYTSCG GISPAYTLPI TLDVGTDNPQ LLEDPMYMGW RHPRIGGEEY AEFIEAFMQA VHVRWPDTLI QFEDFAQKNA MPILERYKDR YCCFNDDIQG TAAVAVGSLL AACKAAGTEL NQQRIAFLGA GSAGCGIAEA IVAQMVSEGI SDEQARTQVC MVDRWGLLLD NMPNLLPFQQ KLAQKCTNIQ NWSNFSDNIS LLDVVNNTKP TVLIGVSGVP GLFTEEIIRA MHSHCARPII FPLSNPTSRV EATPKDILHW TSGQALVATG SPFEPVVVDG ETFEIAQCNN SFIFPGIGLG VLASGARHVS DAMLMASSRA LAECSPLAID GSGPLLPKLE DIHAVSKHIA FAVGKVAVEQ GLTLPMSDEI LQQSIEGNFW SPEYRRYKRT SF
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