| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3558 |
|---|
| Symbol | |
|---|
| ID | 7088671 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 4222398 |
|---|
| End bp | 4223183 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 643462442 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002359463 |
|---|
| Protein GI | 217974712 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00233545 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.0372974 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTAAGT TATTTCGTAC CTTTTTTATT TTTCTACTCT TATTATCGAG CCGCGCTGGT
GTAGCAAATT CTCTTGACGT CAGTGACACA AAAACAGAAC GTGGTAATTA CAGTGCAAGA
CAGGCACAAA GCCACGACCT ACAAGGTCTA TACGCACTCA GCAGTCAGAC CTTTGATGCG
CCTCGTCAAG CCTCGAATGA CTTATCCGTT CTCCATCACC AAGCCTATGA TGCTCAAGCT
GAACTGGCTC AGTTGCTTAC CCGAATTGCC CATCATTCAC AGACGCAAGT GATTATTCCT
CCGGTGAAGA GTTATCAGAG AGCTGCCGAT AAAGTGGCGA CAAAATTTAA CGGTGACGCC
AGCCAAATTA CCGACCTGGC AAGGGCAAGT ATCGTGACCG ACAGCATTCA AGATCTGATG
CAGGCTTACC AAGCCTTGAA CGAACAGACC CAAGTGGTGA AGCAAAAAAA CCGCTTTGCT
GAACCTAAAG CCTCAGGCTA TCGCGATCTC AACTTGCTGG TACGTTTACC CCAATCGGGG
ATGATTGCCG AGGTGCAATT ACACTTGCAG GATATCGCCG ATATCAAAAG TGGCCCAGAG
CACAAGGTAT ATGAAAAAGT GCAAAGGATT GAGGCCAATG CCCGTAAACA GCAAAGATCA
CTCAGTGAGT TTGAGCTGGC ACAGATTGCC CAATTACGCC AAGAATCACA CAAGCTGTAC
CACAAAGCAT GGCTTAACTA TAAGCGAGTC GATGAAGCCA GTTTATTAAG AGTCTCAGTC
GCTTAA
|
|---|
| Protein sequence | MTKLFRTFFI FLLLLSSRAG VANSLDVSDT KTERGNYSAR QAQSHDLQGL YALSSQTFDA
PRQASNDLSV LHHQAYDAQA ELAQLLTRIA HHSQTQVIIP PVKSYQRAAD KVATKFNGDA
SQITDLARAS IVTDSIQDLM QAYQALNEQT QVVKQKNRFA EPKASGYRDL NLLVRLPQSG
MIAEVQLHLQ DIADIKSGPE HKVYEKVQRI EANARKQQRS LSEFELAQIA QLRQESHKLY
HKAWLNYKRV DEASLLRVSV A
|
|---|
| |