Gene Sbal223_3549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_3549 
Symbolipk 
ID7088662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp4211861 
End bp4212715 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content50% 
IMG OID643462433 
Product4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 
Protein accessionYP_002359454 
Protein GI217974703 
COG category[I] Lipid transport and metabolism 
COG ID[COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase 
TIGRFAM ID[TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value4.28638e-05 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCCGCTG CAATTTCCCG CAATTGGCCT GCGCCAGCCA AGCTCAACTT GTTTTTGCAC 
ATAAATGGTC GCCGCGCCGA CGGTTACCAC GAACTGCAAA CCTTGTTTCA GTTTATCGAT
TGCTGCGACA TGCTCGATTT TAAGGTCACT GAAACCCCTG AACTGATTTT GCACTCCAAT
ATGTCGGGCG TTGTCGCTGA CAGCGATAAC TTAATTCTGC GAGCCGCAAA ATCATTACAG
CAAACCACAG GCTTTAACGG TGGCGCTGAG ATCTGGCTGG ATAAACGGCT GCCCATGGGC
GGCGGTTTAG GCGGCGGCTC GTCCGATGCT GCGACCACAT TAGTGGCATT GAACAAGTTA
TGGCATACCC AATTATCGAC CGAAGAATTG GCTAAAATCG GCCTTAAATT GGGTGCCGAT
ATTCCTGTTT TTATTCATGG TTTCGCCGCT TTTGCCGAAG GTGTGGGTGA ACGCTTACAA
GCAGTAAATC CGAGTGAGCC TTGGTACTTA GTCATAGCAC CCGATGCCCA TGTTTCCACC
GCAGACGTAT TCCAAGATCC ACTTTTACCG CGTGATACCC CGAAACTGGC CATAGATACC
TTAATGAGCC AACCTTGGGC AAATGATTGC CAAAAACTAG TCGTTTCTAA ATACCCTCAA
GTTGCCAAGG CATTAGGCTG GCTGCTAGAA TATGCGCCGT CGAGAATGAC AGGAACAGGC
GCATGCGTGT TCGGGGAATT CACACAACAG CAACAAGCTC TCGCAGCCTT GGCGAAATTA
CCGTCTGAAA TGCAAGGATT TGTTGCACAA GGGATGAATC TTTCGCCGCT CATCACGCGA
CTCAGTCACC CTTAA
 
Protein sequence
MPAAISRNWP APAKLNLFLH INGRRADGYH ELQTLFQFID CCDMLDFKVT ETPELILHSN 
MSGVVADSDN LILRAAKSLQ QTTGFNGGAE IWLDKRLPMG GGLGGGSSDA ATTLVALNKL
WHTQLSTEEL AKIGLKLGAD IPVFIHGFAA FAEGVGERLQ AVNPSEPWYL VIAPDAHVST
ADVFQDPLLP RDTPKLAIDT LMSQPWANDC QKLVVSKYPQ VAKALGWLLE YAPSRMTGTG
ACVFGEFTQQ QQALAALAKL PSEMQGFVAQ GMNLSPLITR LSHP