| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3549 |
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| Symbol | ipk |
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| ID | 7088662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 4211861 |
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| End bp | 4212715 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 643462433 |
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| Product | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
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| Protein accession | YP_002359454 |
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| Protein GI | 217974703 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
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| TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0000428638 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCCGCTG CAATTTCCCG CAATTGGCCT GCGCCAGCCA AGCTCAACTT GTTTTTGCAC
ATAAATGGTC GCCGCGCCGA CGGTTACCAC GAACTGCAAA CCTTGTTTCA GTTTATCGAT
TGCTGCGACA TGCTCGATTT TAAGGTCACT GAAACCCCTG AACTGATTTT GCACTCCAAT
ATGTCGGGCG TTGTCGCTGA CAGCGATAAC TTAATTCTGC GAGCCGCAAA ATCATTACAG
CAAACCACAG GCTTTAACGG TGGCGCTGAG ATCTGGCTGG ATAAACGGCT GCCCATGGGC
GGCGGTTTAG GCGGCGGCTC GTCCGATGCT GCGACCACAT TAGTGGCATT GAACAAGTTA
TGGCATACCC AATTATCGAC CGAAGAATTG GCTAAAATCG GCCTTAAATT GGGTGCCGAT
ATTCCTGTTT TTATTCATGG TTTCGCCGCT TTTGCCGAAG GTGTGGGTGA ACGCTTACAA
GCAGTAAATC CGAGTGAGCC TTGGTACTTA GTCATAGCAC CCGATGCCCA TGTTTCCACC
GCAGACGTAT TCCAAGATCC ACTTTTACCG CGTGATACCC CGAAACTGGC CATAGATACC
TTAATGAGCC AACCTTGGGC AAATGATTGC CAAAAACTAG TCGTTTCTAA ATACCCTCAA
GTTGCCAAGG CATTAGGCTG GCTGCTAGAA TATGCGCCGT CGAGAATGAC AGGAACAGGC
GCATGCGTGT TCGGGGAATT CACACAACAG CAACAAGCTC TCGCAGCCTT GGCGAAATTA
CCGTCTGAAA TGCAAGGATT TGTTGCACAA GGGATGAATC TTTCGCCGCT CATCACGCGA
CTCAGTCACC CTTAA
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| Protein sequence | MPAAISRNWP APAKLNLFLH INGRRADGYH ELQTLFQFID CCDMLDFKVT ETPELILHSN
MSGVVADSDN LILRAAKSLQ QTTGFNGGAE IWLDKRLPMG GGLGGGSSDA ATTLVALNKL
WHTQLSTEEL AKIGLKLGAD IPVFIHGFAA FAEGVGERLQ AVNPSEPWYL VIAPDAHVST
ADVFQDPLLP RDTPKLAIDT LMSQPWANDC QKLVVSKYPQ VAKALGWLLE YAPSRMTGTG
ACVFGEFTQQ QQALAALAKL PSEMQGFVAQ GMNLSPLITR LSHP
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