Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_3468 |
Symbol | |
ID | 7086082 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 4125550 |
End bp | 4126653 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 643462354 |
Product | helix-turn-helix domain protein |
Protein accession | YP_002359375 |
Protein GI | 217974624 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2856] Predicted Zn peptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGCAG AACGCTTAGA ACGAGCCCGT AAGGCTGCCG GGCTATCCAT GAATGCATTA GCCAACGAGG TAGGACTGTC CGCTAACGCC ATTAAAAAGT ATGAACATGG CACGGCTATG CCTTCTTCTT CAAACCTACT AAAACTCGCG AAAGCGCTCG ATGTGCGCAC TGAGTACTTC TTTCGTCCAA CGAAGGTGAA ACTAGAGGGC GTAGAGTACC GCAAGCGTGC GAGTACACCA AAGAAAGTTT TAGACCGAAT TAATGGCGAT GTTTTAGAAC AAGCTGAACG TTGGCAAGAG CTTTTAGAGT TGTATCCCGA CTCAGTGAAG CCTATCCCTG AGTTTACTTT ACCAAATGAG CTTCCTGAAC AAATTACTAG CATAGAACAA GTTGAAGACT TAGCTATTCA AATGCGCCAT GCTTGGGAGC TAGGGCTAAA CCCTATTCAC GATATGATCG ATACCCTCGA AGCTAAGGGC GTGATGATTA TTACCACGGA TGTGGAAACA GATAAGAAGT TTGACGGTTT AGCGGGCAAG ATTGGTAGCA CTCCTGTAGT GGTGATCTCT ACCGCCCAAA GTGGTGACCG TCAGCGCTTC ACCTTGGCCC ATGAACTTGG GCACTTAGTC GTGCATGGTC GTTTAGCTGA AGGGATTGAT GAGGAGAAGG CTTGTAATGC CTTTGCTGGT GCATTTCTTT TACCTACCCA ATCACTTATT GAACACTTGG GTGAAAAGCG CCGTCATATT GAACCGCGTG AATTACTGAT GCTAAAGCAC GAATACGGTA TTAGCATGCT AGCGGCACTG TTTCGAGCTG GCCAATGTGG AATAATTACG CCTGCGACTC AGAAAAACCT ATTTATGCTG TTTAGCAAAA ATGGCTGGCG AACGGAGGAG CCAGGAAAAG CATACCCTCA TGAATCGACT TATCTACATA AGCAGTTGGT ATATCGTGCT TTAGGTGAAG AATACATAGG GGAGTCAAAA GCTGCAGAGT TACTTGGCAT GTCTGTTTCT AGCTTTCGTA AAGAACGAAA GTTGGAGGTG CCGACTCAAG CACAGTTAGC TCAGGAGGCT AGCCGTGCAG CAGCTGCTAA TTAG
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Protein sequence | MFAERLERAR KAAGLSMNAL ANEVGLSANA IKKYEHGTAM PSSSNLLKLA KALDVRTEYF FRPTKVKLEG VEYRKRASTP KKVLDRINGD VLEQAERWQE LLELYPDSVK PIPEFTLPNE LPEQITSIEQ VEDLAIQMRH AWELGLNPIH DMIDTLEAKG VMIITTDVET DKKFDGLAGK IGSTPVVVIS TAQSGDRQRF TLAHELGHLV VHGRLAEGID EEKACNAFAG AFLLPTQSLI EHLGEKRRHI EPRELLMLKH EYGISMLAAL FRAGQCGIIT PATQKNLFML FSKNGWRTEE PGKAYPHEST YLHKQLVYRA LGEEYIGESK AAELLGMSVS SFRKERKLEV PTQAQLAQEA SRAAAAN
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