| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3412 |
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| Symbol | mdoD |
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| ID | 7086026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 4051431 |
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| End bp | 4053119 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 643462298 |
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| Product | glucan biosynthesis protein D |
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| Protein accession | YP_002359319 |
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| Protein GI | 217974568 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3131] Periplasmic glucans biosynthesis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000028825 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACCCA ATTTATTTCC CGAACAAAGA AACGTTTACC AACAATCGAT GGTGACAGTA
CCTTCGATTG AAGCCCAATC CTCCTCTCGT CGCGGCCGTT TGCAGCGCAT GGTTGGCAGC
GTATTGTTAA CCTGTAGCGT ATTGCTGAGT CTTTCGGCGT GTGCGGCGGG TAAGCAGGCG
TCACCACAAG AGGGTGAAGA GTTCAGTTAC GCTTGGCTTA AGGGCTATGC CCGTACTATG
GCTGCACAAC CCTATGAAAG CCATAAAGGC GAATTGCCTA AAAGCCTTCA GGGCATGAGC
TGGGATGATT ACCAACAATT CCACTTTAAG AAAAAAGCCG CACTGTGGCG CGATCAGGAC
TCGGAGTTTC GTGCCGAGCT GTTCCACCTA GGGCTGTATT TCGACACGCC AATTCACATT
TATGAATTGA ATGAAGGCAA GGCTAAGTTA ATCGACTATT CGCCTTCTAT GTTCGATTAC
GGCAAGTCAA AGGTGAAAGG CAGTCAGTTG CCTAAGGATC TTGGCTTTGC GGGTTTCCGT
ATGCAGTTCA ATACCGATTG GGAACGTGAC GTTGTCGCTT TCCTTGGCGC CAGTTATTTC
CGCGCTGTGG GTCATGAGAT GCAATACGGC CTGTCGGCTC GTGGTTTAGC GGTGGATACT
GCGCTGCCAA AACCTGAAGA GTTTCCAATG TTCACCGACT TCTGGTTAGA AAAACCTAAA
CCAGGATCGA ACATCACGAC TGTGTATGCC TTGTTAGACT CTCCGAGTGT GACAGGTGCT
TACCGTTTCG ATATCGAGCC GGGTGAGCGT TTAAAAATGA AAGTGGATGT GGCTGTTTAT
CCACGTAAAG CGATTGAACG TTTAGGTGTA GCGCCACTGA CCAGTATGTT TATGGTGGGT
GAGAACGATC GCCGCACCGG TTACGACTGG CGTCCAGAAA TCCATGATAC CGATGGCTTA
GCCATGCACA CGGGTAATGG TGAATGGATT TGGCGTCCAC TAGGTAACCC AGAAAACCTG
CGATTCAACG CCTATAGCGA TGAAAATCCA AAAGGTTTTG GTTTACTGCA ACGTGACCGT
AACTTCGATC ACTATCAGGA TGACGGCGTG TTTTACGATA AACGCCCAAG CCTGTGGATT
GAACCAACAA GCAGTTGGGG CAAAGGTTCG GTGCAGTTAG TTGAAATCCC AACACTGGAT
GAAACCTTCG ATAACATAGT GGCTTTCTGG AATCCTGCTG AGCCGATTGT TCCGGGTCAA
GAGCTGCTGT ATAGCTACAA CATGTATTGG GGCGGCATTC CTCCGGTTCA ATCACCCCGT
GCTCGCGTTG TTGATACCTT CACCGGGATT GGCGGCGTAG TTGGCCAGAA ACGCAAATAC
TACAGTAAGC GTTTTGTGGT GGATTTCGCG GGCGGCACTT TGCCTATGAT AGGCAAAGAC
ACCCAAGTAA AAGCCGTGAT CACTGCATCT GAAGGTAAAG TCGAAATTGA ATCTGCCCGT
CCTCTAGCGT CCATTAATGG TTACCGCGCT ATGTTTGACG TAGTGCCACC CGGAGACGGC
ACTGAGCCGA TTAACCTGAG AGTCTATTTA GAAGTCGATG GTCAGCCATT GTCTGAAACT
TGGATGTATC AGTGGAATCC GCCTGCTAAG GATGATCGTG AATTGCACAA TGCGGGTCAT
CTGCAATAA
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| Protein sequence | MQPNLFPEQR NVYQQSMVTV PSIEAQSSSR RGRLQRMVGS VLLTCSVLLS LSACAAGKQA
SPQEGEEFSY AWLKGYARTM AAQPYESHKG ELPKSLQGMS WDDYQQFHFK KKAALWRDQD
SEFRAELFHL GLYFDTPIHI YELNEGKAKL IDYSPSMFDY GKSKVKGSQL PKDLGFAGFR
MQFNTDWERD VVAFLGASYF RAVGHEMQYG LSARGLAVDT ALPKPEEFPM FTDFWLEKPK
PGSNITTVYA LLDSPSVTGA YRFDIEPGER LKMKVDVAVY PRKAIERLGV APLTSMFMVG
ENDRRTGYDW RPEIHDTDGL AMHTGNGEWI WRPLGNPENL RFNAYSDENP KGFGLLQRDR
NFDHYQDDGV FYDKRPSLWI EPTSSWGKGS VQLVEIPTLD ETFDNIVAFW NPAEPIVPGQ
ELLYSYNMYW GGIPPVQSPR ARVVDTFTGI GGVVGQKRKY YSKRFVVDFA GGTLPMIGKD
TQVKAVITAS EGKVEIESAR PLASINGYRA MFDVVPPGDG TEPINLRVYL EVDGQPLSET
WMYQWNPPAK DDRELHNAGH LQ
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