Gene Sbal223_3389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_3389 
Symbol 
ID7087215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp4021839 
End bp4023026 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content48% 
IMG OID643462275 
Productaromatic amino acid permease 
Protein accessionYP_002359296 
Protein GI217974545 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0814] Amino acid permeases 
TIGRFAM ID[TIGR00837] aromatic amino acid transport protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATTCAA AAATGTTAGG CTCGATCGCC ATCGTTGCCG GGACGGCCAT TGGCGCAGGT 
ATGTTAGCCT TACCGTTAGC CACCGCGGCT TTAGGTATTA TTCCAGCGTT AGTGTTACTC
GTCGTTATTT GGGGCGTATC TGCCTATACC TCATTACTGA TGCTCGAAAT TAACTTACGC
ACTGGCGTGG GCGATAACGT GCATGCCATT ACGGGTAAAT TACTGGGTAA AAAAGGTCAA
ATTATTCAAG GGGCTTCTTT CCTGAGTTTA TTGTTTGCCT TGACCGCGGC TTATCTCACT
GGTGGTTCTT CGTTATTAGT GCTTAAAGCG AAGAACATGT TTGATATCGT GCTCGATAAT
CAAGCCGCGG TATTGTTGTT TACCTTAGTG CTCGGCGGAT TTGCGGCGCT CGGTGTGGCT
TGGGTCGATA AAGTGTCCCG CTTCCTGTTT TCGTTAATGA TTTTACTGCT GGTGGTTGTG
GTGTTATTTC TTCTGCCTGA AGTCAGTATT GCCAGTATGG CAACGGGCGC GATTGCCGAG
TCTATGACCA GCAGTTGGAT GGCGGCGATT CCCGTAGTGT TTACTTCTTT TGGTTTCCAC
GTTTGTATTG CCACTTTAGT GCGTTATCTG GATGGCGATG CCGTTTCACT GCGCAAGGTA
TTGTTAATTG GTTCGACGAT TCCACTCGCT TGTTATGTGC TTTGGCTATT GGTGACTTTA
GGCACAGTAG GCGGCTATGA AGTGAGTGGT TTCGAAGGTT CATTACCGTC ACTGGTGACG
GCATTGCAGG ATATTGCCCA TACGCCTTGG ATCAGCAAAT GTATTTCGTT ATTCGCCGAT
TTAGCCCTAG TGACCTCATT CCTAGGGGTG ACCTTAAGCC TGTATGACTT TGTCGCCGAG
TTAACCCGTG CTAAAGAGAC GTTTGCCGGC CGTATTCAGA CCTGGTTGTT AACCTTTATT
CCGCCAGTAT TATGTGCTCT GTATCTGCCA GAAGGCTTTG TGGCGGTACT GGGATTCGCA
GCTGTGCCAT TGGTGGTGAT GATCATCTTC TTGCCAATCG TGATGGCATT GCGTCAACGC
CAAACACAAC CGGGCGGTTA TCAAGTGTCG GGTGGTTCTG CGGGCTTAGT GATTGCAGGT
TTGTTAGGCG CTGTGATTGT GGGCGCCCAG CTATTTGTTG CAATCTAA
 
Protein sequence
MNSKMLGSIA IVAGTAIGAG MLALPLATAA LGIIPALVLL VVIWGVSAYT SLLMLEINLR 
TGVGDNVHAI TGKLLGKKGQ IIQGASFLSL LFALTAAYLT GGSSLLVLKA KNMFDIVLDN
QAAVLLFTLV LGGFAALGVA WVDKVSRFLF SLMILLLVVV VLFLLPEVSI ASMATGAIAE
SMTSSWMAAI PVVFTSFGFH VCIATLVRYL DGDAVSLRKV LLIGSTIPLA CYVLWLLVTL
GTVGGYEVSG FEGSLPSLVT ALQDIAHTPW ISKCISLFAD LALVTSFLGV TLSLYDFVAE
LTRAKETFAG RIQTWLLTFI PPVLCALYLP EGFVAVLGFA AVPLVVMIIF LPIVMALRQR
QTQPGGYQVS GGSAGLVIAG LLGAVIVGAQ LFVAI