Gene Sbal223_3369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_3369 
Symbol 
ID7087195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp3994290 
End bp3995408 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content50% 
IMG OID643462255 
ProductTRAP dicarboxylate transporter- DctP subunit 
Protein accessionYP_002359276 
Protein GI217974525 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4663] TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAAGT TTGGGAGTGT ACTCATCTTA ATGCTGCTGA TGGGGCTGAG CGGTTGTAAT 
CCCGCAGCCA GTGATGCGCA AAGCGTAGCC GTTTCCCATG CCGCAACGGA TGACCCCCAA
GCTATCCCCA CTATTGAATG GCGCCTTGCG ACCTCTTGGC CCAAAAACTT CCCCGGTTTA
GGTATGGCTC CCGAACGCTT TGCCCATTTA GTCAATGAAA TGTCTAACGG TCGGTTAAAG
ATCCAGGTTT ATGGCGCGGG TGAGTTAATG CCAGCGTTTG CCGTATTTGA TGGTGTGAGT
CAGGGTAAAA TTCAAATGGC CCATGCCGCT TCTTACTACT GGAAAGGCAA GGCACCCGCG
GCGCAGTTTT TTTCATCGAT TCCCTTTGGT ATGACGGCGC AAGAAATGAA CGGCTGGCTG
CACTACGGCG GTGGCATGGC GTTGTGGGAT GAAGTGTATC GCCCCTTTGG CATCATTCCC
CTCGCGGGTG GCAATACTGG GATGCAAATG GGCGGCTGGT TCAATAAACC GATTAATACG
ATTGCTGATT TTAAGGGATT GAAGATCCGC ATGCCGGGCT TGGGCGGCGA AGTATTAAAG
CGTGTCGGTG CTATTCCTGT GAATATGGCG GGGCGTGAAC TCTATGGTGC ATTGCAAACA
GGCTCGATTG ATGCGGCTGA GTGGGTAGGG CCATTGAACG ACCTTGCTTT CGGTCTACAT
AAAGTGGCGA AGTACTACTA TTACCCTGGT TGGCATGAGC CGGGTTCTAA TATGGAATTC
TTGATTAATA AAGCCGCCTT CGAGAGTTTA CCTCAAGATT TACAAGCCAT AGTTAAAGTC
GCGGCGAGAG CCATTAATCA AGATATGCTG GATGAATACA CGACCCGTAA TGTGGCCGCC
CTTGAAACCT TAGTGAATGA TGAAGGAGTG GTGCTTAAGG CGTTTCCACC GAAAGTGTTG
TTGGAACTTG AGAAAATATC TAAACAAGTG ATTGAAGAGC AAGCTAATCA AGATCCCTTA
ATGCGCAAAG TGTACGCCGC CTATCACGCC TACGAGCAAG GTGTGCGCCA GTATCATAAA
ATATCTGAGG ATGCTTACAG CCAACAGCGC CAACACTAA
 
Protein sequence
MRKFGSVLIL MLLMGLSGCN PAASDAQSVA VSHAATDDPQ AIPTIEWRLA TSWPKNFPGL 
GMAPERFAHL VNEMSNGRLK IQVYGAGELM PAFAVFDGVS QGKIQMAHAA SYYWKGKAPA
AQFFSSIPFG MTAQEMNGWL HYGGGMALWD EVYRPFGIIP LAGGNTGMQM GGWFNKPINT
IADFKGLKIR MPGLGGEVLK RVGAIPVNMA GRELYGALQT GSIDAAEWVG PLNDLAFGLH
KVAKYYYYPG WHEPGSNMEF LINKAAFESL PQDLQAIVKV AARAINQDML DEYTTRNVAA
LETLVNDEGV VLKAFPPKVL LELEKISKQV IEEQANQDPL MRKVYAAYHA YEQGVRQYHK
ISEDAYSQQR QH