| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3324 |
|---|
| Symbol | |
|---|
| ID | 7087150 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 3942252 |
|---|
| End bp | 3943247 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 643462210 |
|---|
| Product | Polyprenyl synthetase |
|---|
| Protein accession | YP_002359231 |
|---|
| Protein GI | 217974480 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00000403675 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCAC AACCAGAGTC TACTATGGAT TTAAACGCTA TTCGTCAACT GGCTGACACT
GATATGCAAG CAGTCAATCA GCTGATATAT AAACAGCTTG AATCAGATGT CGCCCTAATT
AATCAATTAG GTTTTTACAT TATTAATGGT GGTGGTAAAC GTCTTCGTCC TCTGCTGTCG
GTATTAGCCG CACGTGCGGT GAGCTACGAA GGCGAAGCGC ATCTTAAGCT AGCGGCGATT
ATTGAGTTTA TCCATACGGC CTCATTGCTC CACGATGATG TAGTTGATGA ATCGACATTG
CGCCGCGGAC GAGAAACCGC CAACGCACTG TTCGGCAATA GCGCCAGCGT GCTGGTCGGG
GATTTCCTTT ATACCCGTTC ATTCCAGATG ATGACTGAAC TCGACAGCAT GAAAGTGCTC
AGAGTGTTAG CGGATACCAC GAACGTATTG GCCGAGGGCG AAGTCTTACA ACTGATGAAT
TGCAACGATC CTGACACCAC AGAAGAAAGC TATATGCGGG TCATTTATTG CAAAACTGCT
AAGTTGTTTG AAGCGGCCAC TCTGCTTGCG GGTGTGTTAG CGGGTGCGAC GCTAGAGCAA
GAAACCGCCT TAGGTAACTA TGGTAAATAT CTTGGTACCG CCTTCCAGCT TACCGACGAT
TTACTCGACT ATACCGCCGA CAGTGATGAG CTAGGCAAGA ACATAGGTGA TGACCTGGCT
GAAGGTAAAC CAACTCTGCC ACTCATCTAT GCCATTGCCC ATGGCACAGA CGAAGAGAAA
CACCTCATAC GTCAAGCAAT TGAGCAAGGC GATGGGACAC AGGCCATAGA TAAAATCGTG
GCAGCACTGC ACCATTGCGG CGCGTTAAAC TACACCCAGC AAAAAGCGAT TGAAGAATCA
GAGAAAGCCA TCGAGGCATT ATCGATTCTG CCTGACAGCG ACTACAAGCA AGCCTTAGTT
GCGCTTGCTA AGATTTCGGT CGACCGTAAT CATTGA
|
|---|
| Protein sequence | MTPQPESTMD LNAIRQLADT DMQAVNQLIY KQLESDVALI NQLGFYIING GGKRLRPLLS
VLAARAVSYE GEAHLKLAAI IEFIHTASLL HDDVVDESTL RRGRETANAL FGNSASVLVG
DFLYTRSFQM MTELDSMKVL RVLADTTNVL AEGEVLQLMN CNDPDTTEES YMRVIYCKTA
KLFEAATLLA GVLAGATLEQ ETALGNYGKY LGTAFQLTDD LLDYTADSDE LGKNIGDDLA
EGKPTLPLIY AIAHGTDEEK HLIRQAIEQG DGTQAIDKIV AALHHCGALN YTQQKAIEES
EKAIEALSIL PDSDYKQALV ALAKISVDRN H
|
|---|
| |