Gene Sbal223_3287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_3287 
Symbol 
ID7087668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp3904600 
End bp3905313 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content46% 
IMG OID643462173 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_002359194 
Protein GI217974443 
COG category[T] Signal transduction mechanisms
[K] Transcription 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.00523e-05 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.324308 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAGCC CACAATCGAA CCACAGAGTA TTATTGGTTG AAGACGACGT TCGCCTAGCA 
AACTTGATTG TAGATTACCT AAAATCCCAT GGTATGCATG TTGAAGTTGA ACGCCGTGGC
GACACAGTAT TAACGCGATT AATCAATTAC AAGCCAGATA TCATACTGTT AGACATTATG
CTGCCGGGCA TGGATGGCCT CACCCTGTGT GAGAAACTGC CCGACTATTT TGCCGGCCCA
ATCCTGCTAA TGAGCGCGCT TGGCTCAAGC GAAGATCAAA TCAAAGGCTT AGAACTCGGT
GCCGATGACT ATGTGGTTAA GCCCGTTGAT CCTGCTCTGT TAGTGGCGCG GATTAACAAC
TTACTTCGTC GTCAAAATCA GCCACCTCAG GCAGAATCCC ACTGCTTGAC CTTTGGTAAA
CTGAGTATCG ACCCGCATAC CCACGCGATT CGCCTCAATG AAACTGAAAT CGATCTCACC
AGCCATGAAT TCGAGTTGCT GTGGTTACTG GCCTCACAAG CTGGCCAAGT GCTCAGCCGT
CAGTATATTT ATCAGCTGTT ACTCAATATT GATTTCGATG GTAAAGATCG AAAAATTGAT
GTGCGTATCT CTAGATTACG TAAAAAACTC AACGATAATA TCGAGACACC GTTCAGAATT
AAAACCGTTT GGGGACAAGG TTACCTCTTT GCCCCTGAAG CCTGGAATAA CTAA
 
Protein sequence
MTSPQSNHRV LLVEDDVRLA NLIVDYLKSH GMHVEVERRG DTVLTRLINY KPDIILLDIM 
LPGMDGLTLC EKLPDYFAGP ILLMSALGSS EDQIKGLELG ADDYVVKPVD PALLVARINN
LLRRQNQPPQ AESHCLTFGK LSIDPHTHAI RLNETEIDLT SHEFELLWLL ASQAGQVLSR
QYIYQLLLNI DFDGKDRKID VRISRLRKKL NDNIETPFRI KTVWGQGYLF APEAWNN