| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3266 |
|---|
| Symbol | |
|---|
| ID | 7087644 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 3875910 |
|---|
| End bp | 3877733 |
|---|
| Gene Length | 1824 bp |
|---|
| Protein Length | 607 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 643462149 |
|---|
| Product | oxaloacetate decarboxylase |
|---|
| Protein accession | YP_002359173 |
|---|
| Protein GI | 217974422 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG5016] Pyruvate/oxaloacetate carboxyltransferase |
|---|
| TIGRFAM ID | [TIGR01108] oxaloacetate decarboxylase alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.0475332 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTTTTG TATCTAATTC TACGACGGCA GTGGCTAAGC CATTATTTTT AACTGATGTC
GTATTGCGGG ACGCACATCA ATCCATTTTA GCGACGCGCT TACGCATTGA TGACATGTTA
CCTATAACGC CGTTACTCGA TAAGATCGGT TTCTGGTCAC TGGAATCTTG GGGTGGTGCG
ACGTTTGATG CCTGTATTCG TTATCTTGGT GAAGATCCTT GGGATCGAAT TCGTGAGCTG
AAAAAGGCCA TGCCGAATAC GCCGCAGCAA ATGTTGCTGC GTGGCCAAAA CCTCTTAGGT
TATCGCCATT ATGCCGATGA TTTAGTGACG CGTTTTGTTG AGCGTGCCCA TACCAATGGC
GTCGATGTAT TTCGTATTTT CGATGCGATG AACGATGTTC GCAATCTCGA GACTGCGGTG
AAAGCGGTGC GCCAAGTTGG CGGCCATGCG CAGGGGACGA TTTCGTATAC CACGAGTCCA
GTGCATACCA TAGAGACGTG GGTTGATATG GCAAAACGTC TCGAAGATAT GGGTTGTGAT
TCTTTGTGTA TCAAAGATAT GGCGGGCTTA CTTAAGCCGA TGGAAGCGTT TGAGCTCATT
AGCAGACTCA AATCTCAGAC CCAACTCGTG TTATCTATGC ATTGTCATGC GACGACAGGG
TTGAGTACTG CCACTTATCA GAAAGCCATT GAAGCGGGTG TCGATGTGCT CGATACGGCA
ATTTCGTCGA TGAGCCAAAC CTATGGACAT ACTGCAACCG AAACCGTTAT CGCTATGGTG
GAAGATACTG AGCGCGCAAC GGGTTACGAC ATGGTGTTGC TTGAAGAGAT TGCCGCTTAT
TTTCGTGAAG TGCGCAAGAA GTACGCTAAG TTTGAAGGCG CGCTGAAAGG CATCGATTCG
CGGATCTTAC GTGCCCAAGT GCCTGGTGGC ATGCTGACCA ATATGGAGAG CCAATTAAAG
GAGCAAGGCG CGGCCGATAA GATGGACTTG GTATTGGAAG AAATTCCCCG CGTACGTGCT
GACTTAGGTT TCTTGCCGTT AGTGACACCC ACATCGCAAA TTGTCGGCTC GCAGGCGGTC
ATTAATGTGC TAATGGGCGA GCGTTATAAG TCACTGACTA AAGAGACTGA AGGCGTGCTT
AAGGGCGAAT ATGGCGCGAC GCCTGCGCCA GTAGATGCCG CATTGCAAGC CAGAGTCTTG
CAAGGAGCTG AAGCCATTAC ATGTCGCCCT GCGGATTTAT TAACACCAGA GCTGGCTAAG
TTACGGCTTG AGTTAGCTGA TAAAGCACAG GAACAAGGCA TTCGCCTATC TTCAGAGCAT
GACGATGATG TGCTGACCTA TGCACTCTTC CCACAAATAG GATTACAGTT CTTAAAGAAT
CGTGACGATC CAAGCGCCTT CGAGCCTAAA CCTGAGCTGA CTTCAGCACT TGCTACTAAT
GCTGCGGATC GTGGCCCTGA AACCTACACT GTGACTGTCG AAGGGCAAGA GTACGTAGTT
GAAGTCGCCG CAGGCGGTGA GATCTCGCAA ATCCAGCCAC AGGGCCAAAG TGTTCATGCT
GTGCAAACTG CTACGGCGAG CACTATGCCA ACTGCGTGCC ATGGAGAGAT CAGGCTTGAA
ATGAGCGCGC CGCTGTCGGG CAACATCTTC AAAGTTCATG TTTCTCCAGG CGATAGAGTG
TGTGAAGGCG ATGTCGTGAT CATCCTTGAG GCGATGAAGA TGGAAACTGA AATTCGTGCT
CAGGGCGATG GCATTATCGC TAAGCTCTGG GTGAAAGAAG GCGACTCAGT ATCTGTGGGT
TCTCAATTAC TGGCCTTGGC GTAG
|
|---|
| Protein sequence | MTFVSNSTTA VAKPLFLTDV VLRDAHQSIL ATRLRIDDML PITPLLDKIG FWSLESWGGA
TFDACIRYLG EDPWDRIREL KKAMPNTPQQ MLLRGQNLLG YRHYADDLVT RFVERAHTNG
VDVFRIFDAM NDVRNLETAV KAVRQVGGHA QGTISYTTSP VHTIETWVDM AKRLEDMGCD
SLCIKDMAGL LKPMEAFELI SRLKSQTQLV LSMHCHATTG LSTATYQKAI EAGVDVLDTA
ISSMSQTYGH TATETVIAMV EDTERATGYD MVLLEEIAAY FREVRKKYAK FEGALKGIDS
RILRAQVPGG MLTNMESQLK EQGAADKMDL VLEEIPRVRA DLGFLPLVTP TSQIVGSQAV
INVLMGERYK SLTKETEGVL KGEYGATPAP VDAALQARVL QGAEAITCRP ADLLTPELAK
LRLELADKAQ EQGIRLSSEH DDDVLTYALF PQIGLQFLKN RDDPSAFEPK PELTSALATN
AADRGPETYT VTVEGQEYVV EVAAGGEISQ IQPQGQSVHA VQTATASTMP TACHGEIRLE
MSAPLSGNIF KVHVSPGDRV CEGDVVIILE AMKMETEIRA QGDGIIAKLW VKEGDSVSVG
SQLLALA
|
|---|
| |