Gene Sbal223_3253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_3253 
Symbol 
ID7087631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp3859496 
End bp3861259 
Gene Length1764 bp 
Protein Length587 aa 
Translation table11 
GC content51% 
IMG OID643462136 
Productputative sulfate transporter YchM 
Protein accessionYP_002359160 
Protein GI217974409 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0659] Sulfate permease and related transporters (MFS superfamily) 
TIGRFAM ID[TIGR00815] high affinity sulphate transporter 1 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00237703 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGTCACACT CAGCTCATTT ATTTTCCCTA AGGATCGCCC ACGCACTCAC AGAAGCTTGC 
GTGAAGGATA AGTATTCGTT TAGACGTTTT GGGCAAGATC TTCTTGCTGG TCTCACTGTA
GGTATTATTG CGATTCCATT AGCGATGGCA TTAGCCATTG CCAGTGGCGT TGCGCCTCAA
TACGGCTTGT ATACCGCCAT AGTCGGTGGC TTTATTATCG CCATGTCTGG CGGCTCACGT
TACAGCGTGT CCGGCCCGAC AGCGGCATTT GTGGTATTGC TCTACCCCAT AGCCCAACAG
TTTGGTTTAG CAGGATTATT AATCGCGACT GTGATGTCAG GAATGATACT CGTCGGTATG
GCGACGTTGC GCCTAGGTCG GTTGATTCTG TATATTCCCG AATCCGTCAC CTTAGGTTTT
ACCGCAGGGA TTGGCGTAGT GATTGCCACC TTGCAGCTAA AGGACTTTTT CGGGCTCGAA
ATTGCCCATA TGCCGGAGCA ATATCTGGCC AAGCTAATGG CATTAGCCCA AGCGCTACCT
TCGGTCCATT TGCCTAGCTT ACTGGTTGCA AGCGCCACCC TAGCGACTAT GCTGCTTTGG
CCGAAACTCA AAACACCTGT GCCAGCGCAC CTTCCTGCAA TCATACTCGG CACTATCCTC
GCCTTGGTGC TCAATGCCAT GGGCGCTGAT ATAGAAACCA TAGGTACTCG TTTCCACTAT
CAACTGAGTG ATGGCACCAC AGGCATGGGG ATCCCAGCGG TATTGCCGAG TTTCGAGTGG
CCTTGGCTGC AAGCTGGCGC CAATGGTCAA GCTTTTCAGT TCAATTTAGC GACCTTTCAA
GCCTTGTTAC CTGCCGCCTT TGCCATTGCC ATGTTAGGGG CGATTGAATC GCTACTTTGT
GCTGTGGTGC TCGATGGCAT GACAGGCAAA CGCCATAGTG CCAACAGTGA GTTACTGGGC
CAAGGCATAG GTAATATCAT CACGCCGTTT TTTGGCGGCA TTCCAGCGAC AGCGGCAATC
GCCCGTAGCG CGGCGAACGT CAAAGCGGGC GCACAGAGTC CAATTGCGGC CATGATCCAC
GCCATAGTGG TATTGTTTGG TTTAGTCGCC TTAGCGGGCG TACTCGCCTA CTTGCCGATG
TCGGCCATGG CTGCCCTGCT ACTCGTCGTA GCTTGGAACA TGAGTGAGGC CCACAAAGCG
CTGCATTTAG TTAAAACCGC GCCCACCAGC GATATCATGG TCTTTGTTAG CTGTTTTTCA
TTAACGGTTA TTTTCGACAT GGTCATTGCC ATCAGTGTGG GGATCATTCT CGCCGCCTTG
CTGTTTATGA AGGAAATTGC CGAGATGACA AGGCTTTACG ATATCAGCAC CAACAAGCGT
TATGTCGATC AAGAGTTACC CGCCGATTGG GCCGTTCTCA AAATTAACGG GCCACTCTTC
TTCGCCGCTG CCGACCGGAT TTTCTCCGAA ATCGCCAGTC TCACCGAAGA TAAACAAGTG
ATAGTGCTGT ATCTCGATGG GGTCTCGATT TTGGATGCTG GAGGCTTAGC CGCGCTGACA
AAACTGATTG AAAAATGTAA AGCAAATAAG ACTAAGCTGA TTATTGCCGA TCTACAGTTC
CAGCCCATTC GAACGCTAGC AAGAGCCAAG ATCCAGCCGA TTGAGGGCGT GTTGAAGTTT
TACTCGACCC TACGAGAAGC CATGGCCGAA GCGCCAGTTA TCACTCAGCA AACAGAAATC
ACTGCGGATA AGCAGACACA GTAA
 
Protein sequence
MSHSAHLFSL RIAHALTEAC VKDKYSFRRF GQDLLAGLTV GIIAIPLAMA LAIASGVAPQ 
YGLYTAIVGG FIIAMSGGSR YSVSGPTAAF VVLLYPIAQQ FGLAGLLIAT VMSGMILVGM
ATLRLGRLIL YIPESVTLGF TAGIGVVIAT LQLKDFFGLE IAHMPEQYLA KLMALAQALP
SVHLPSLLVA SATLATMLLW PKLKTPVPAH LPAIILGTIL ALVLNAMGAD IETIGTRFHY
QLSDGTTGMG IPAVLPSFEW PWLQAGANGQ AFQFNLATFQ ALLPAAFAIA MLGAIESLLC
AVVLDGMTGK RHSANSELLG QGIGNIITPF FGGIPATAAI ARSAANVKAG AQSPIAAMIH
AIVVLFGLVA LAGVLAYLPM SAMAALLLVV AWNMSEAHKA LHLVKTAPTS DIMVFVSCFS
LTVIFDMVIA ISVGIILAAL LFMKEIAEMT RLYDISTNKR YVDQELPADW AVLKINGPLF
FAAADRIFSE IASLTEDKQV IVLYLDGVSI LDAGGLAALT KLIEKCKANK TKLIIADLQF
QPIRTLARAK IQPIEGVLKF YSTLREAMAE APVITQQTEI TADKQTQ