| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3244 |
|---|
| Symbol | |
|---|
| ID | 7087543 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 3849188 |
|---|
| End bp | 3850297 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 643462127 |
|---|
| Product | OmpA/MotB domain protein |
|---|
| Protein accession | YP_002359151 |
|---|
| Protein GI | 217974400 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins
[COG3637] Opacity protein and related surface antigens |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0107614 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.00411399 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTGG AGAACATGAT GAATCATAAA TTAAAATTTG TACTGCTTGC ATCGCTATTA
CCTTTCACTG TATCAGCGGC TCAAGAGCTG ACTCCTTGGT ATGTTGGCGC AGGTTTAGGC
GTTAACAACT ATGAACATAT CGCGACCCAG AATGGTCAAG ATGACCCATA TGCATGGGAT
GTATTCGCAG GCTATATGTT CAATGATTAC TTTGGCGCTG AAATCGGCTT CCGTGATTTA
GGTAATGCTG ATTGGACTAG TGCAGGTATC AGCAATGATG CAGGCGTTAA AGGTTCAACT
TTAGGCTTAG TAGGTATTTG GCCTCTAGCT AATCGTTGGA GCTTATCAGC CGAAGCGGGG
GCAATGTACT ACTCACTCGA AAACAGCCAA AATACAGCAG GCGCATCAAC AAAATATGGT
TCAAGCGACT TTGCTCCATA CTTAGGTGCT GGTGTTGGTT ACAACTTCAC TGATAACCTG
AAGTTACAAG CTAAATACCG TCGTTATGAA AATCTGAATG ACGATTACAA CATCGTTGAA
GCTGATAGCA ACTACTGGGG CTTAGAACTG AGCTACCGCT TCGGTAACAC AGTTGCAGCG
GCACCAGTTG CAGCAGCGGT TATCGCAGCA GCACCACTTG ACTCAGACAA CGATGGTATT
TACGACGATA AAGATCAATG TCCAGCCACA CCAGCAACCC ATAAAGTTGA CTCTGTTGGT
TGTACCATTT ACGAAAACGT AAAAACTAAA GAAGACGTGG GTTCAATCCA GTTTGCTAAC
GATTCAGCTG TAGTTAAACC CGTTTTCTAC AAAGATATCG AAAGACTAGC TAACTACCTG
AACAAGAACC CAGAGTTCAC AGTTGAAATC GCTGGCCACG CCTCACATGT GGGTAAACCA
GAGTACAACA TGGTGCTGTC TGATAAACGT GCTGCAGCAG TTGCTAAGAT TCTTGTAGAC
AAATACGGTA TCAGCCAAAG CCGCGTAACC TCAAAAGGTT ATGGTGAAAC TCAACCGCTA
GTCGCGGGCG ATTCAAAAGA AGCTTACGCT GCTAACCGTC GTATCGAAGC CGTTGTAACA
ACTACAACTA AACAACCTGT TCTTAAGTAA
|
|---|
| Protein sequence | MELENMMNHK LKFVLLASLL PFTVSAAQEL TPWYVGAGLG VNNYEHIATQ NGQDDPYAWD
VFAGYMFNDY FGAEIGFRDL GNADWTSAGI SNDAGVKGST LGLVGIWPLA NRWSLSAEAG
AMYYSLENSQ NTAGASTKYG SSDFAPYLGA GVGYNFTDNL KLQAKYRRYE NLNDDYNIVE
ADSNYWGLEL SYRFGNTVAA APVAAAVIAA APLDSDNDGI YDDKDQCPAT PATHKVDSVG
CTIYENVKTK EDVGSIQFAN DSAVVKPVFY KDIERLANYL NKNPEFTVEI AGHASHVGKP
EYNMVLSDKR AAAVAKILVD KYGISQSRVT SKGYGETQPL VAGDSKEAYA ANRRIEAVVT
TTTKQPVLK
|
|---|
| |