Gene Sbal223_3160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_3160 
Symbol 
ID7087938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp3741005 
End bp3741847 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content44% 
IMG OID643462044 
Productribosomal RNA large subunit methyltransferase A, putative 
Protein accessionYP_002359068 
Protein GI217974317 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.53281 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.164322 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTCTCG AATATCAGTG TCCAACCTGC GGACTTGTGT TAAAACAACA CAAAGCCTCC 
CAAGGTTTTT ATTGTGTCAA TAAGCATCAC TTCGATCGGA ATGAGCAAGG CTATTGGGTT
TTTACTAAAC CACAACGCCA AAAGCCGACT GGTGATTCGC GCGAGCAAGT TAGAGCTAAG
CGTTTTCTGC TCGAATCAGG CATCTTTTCA CCTTTGATCG ATAAACTGGC TGAGATAATC
ACTGGATCTA TTACGGCTGA TGCTTGTTTA TTGGATTATG AATGCGCTGA GGGCTTCTTC
TTGCGTGCTT TAGCTTCCAA GCTGGCTGAG GTCGAAAATC CGCTAAACGT CCAGTACGTT
GGCGTAGCGG ACGCAGAAAA TGCTATCTTT GCTGCAGCGA AGGCGCAGAC TCCTGGGATC
TTGTGTTTAA GCTCTTCTAA AAAATTACCC TTTATCGATA ATTGTGTGGA TTTTATTACT
GTTATTGATC GGCCGTTAAA GGGAAAAGAG TCTGTTAGGA TATTGAAAGA CGCTGGGACC
ATGTTACTGG TTATGCCTGG GCCACGACAC CTATGGCAAC TCAGGGAATA TATTTATCCT
GACTTGGCTG AAAAACCTTT CAAAGTGAAT TTGCCCTCTG CATTATCGGT AAAAGACACT
CAGGCACTGA GCTTCACTTT ATCTGTTACC GGTGAGCAAG CATTAACGCT ATTGGATATG
GCGCCTTATG CGTGGCGTGC AACTGACAAG ATGAAGCACG ATATTCAAGC TAATCATTTT
GAGTCGTTGG AAATTGACTA TGTATTAGTC TCAGCACATA AACGCGTGGT TGAATCGCTA
TAG
 
Protein sequence
MGLEYQCPTC GLVLKQHKAS QGFYCVNKHH FDRNEQGYWV FTKPQRQKPT GDSREQVRAK 
RFLLESGIFS PLIDKLAEII TGSITADACL LDYECAEGFF LRALASKLAE VENPLNVQYV
GVADAENAIF AAAKAQTPGI LCLSSSKKLP FIDNCVDFIT VIDRPLKGKE SVRILKDAGT
MLLVMPGPRH LWQLREYIYP DLAEKPFKVN LPSALSVKDT QALSFTLSVT GEQALTLLDM
APYAWRATDK MKHDIQANHF ESLEIDYVLV SAHKRVVESL