| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3110 |
|---|
| Symbol | |
|---|
| ID | 7087888 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 3687100 |
|---|
| End bp | 3687810 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 643461994 |
|---|
| Product | DNA repair protein RecO |
|---|
| Protein accession | YP_002359018 |
|---|
| Protein GI | 217974267 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1381] Recombinational DNA repair protein (RecF pathway) |
|---|
| TIGRFAM ID | [TIGR00613] DNA repair protein RecO |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0026851 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.0227356 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGTG GCTATGTTCT GCATCATCGT CCGTATCGAG AGTCCAGTGT CTTAGTTAAC
CTCTTAGTTG ACGGCATTGG ACGGGTCGAT GTGGTTGCCC GAACCGGCAG CGGTAAGCGC
TCTATCAAGA GTATTCTCCA GCCCTTTCAA CCGCTGATCT TCGAATTTAG CGGTAAGTCT
GAATTAAAAA CCTTAACTCA AGTCGAAGCC GCTGCGCCTG CTGTGCCTCT ATCAGGCCAA
AGTTTGTTTG CTGGCATGTA TATCAATGAG TTATTGGTTC GCACTTTGTC TGTGCAGCAC
AACGCCGAAG AGTTGTTTCT CATTTATCAT CAAGCTTTAG TCGGCCTTGC CGCGAAGTTT
TGCCAATCTC AACTGCGTTA TATTGAGCTC GCCTTGCTGA GAGAATTAGG TTTTATGCCT
TCGCTTAGCC GCGATACTCA GGGCGAACCA CTCGTTGCTG AAGATTATTA CCAGCTCGTG
CCTGAGTTAG GCTTTCAATT TGTGCTCAAC TCCCGTGCTC GCAATGCCTA TCAAGGTGCC
ATGTTGACGG CGCTTAACGA TAACCAACTC ACCGATGTGC ATTTTTTGAG CGCTAAGTTA
TTGATGCGCT CCCTGTTAAA GCCATTACTC GGGACTAAAC CTTTGCTGAG CCGACAATTG
TTCGTCAGCG CTGCCACGCC AACCAAGATT GATGGGAATA ATTCGCCCTA G
|
|---|
| Protein sequence | MKRGYVLHHR PYRESSVLVN LLVDGIGRVD VVARTGSGKR SIKSILQPFQ PLIFEFSGKS
ELKTLTQVEA AAPAVPLSGQ SLFAGMYINE LLVRTLSVQH NAEELFLIYH QALVGLAAKF
CQSQLRYIEL ALLRELGFMP SLSRDTQGEP LVAEDYYQLV PELGFQFVLN SRARNAYQGA
MLTALNDNQL TDVHFLSAKL LMRSLLKPLL GTKPLLSRQL FVSAATPTKI DGNNSP
|
|---|
| |