Gene Sbal223_3104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_3104 
Symbol 
ID7087882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp3681252 
End bp3682625 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content49% 
IMG OID643461988 
Productsignal recognition particle protein 
Protein accessionYP_002359012 
Protein GI217974261 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0541] Signal recognition particle GTPase 
TIGRFAM ID[TIGR00959] signal recognition particle protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000441877 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0737294 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGAGA ACCTAACCGA CAGACTGTCA CGCACACTGA AAAATATCAG TGGCCGTGGT 
CGCTTAACTG AAGAAAACGT TAAGGAAACC CTGCGCGAAG TGCGTATGGC ACTGCTGGAG
GCCGATGTTG CCCTGCCTGT GGTGCGCGAA TTCGTTAATA ATGTAAAAGA ACGTGCCGTT
GGCCAAGAAG TCTCTAAAAG CTTAAGCCCT GGTCAAGCCT TCATTAAGAT AGTTCAAAGT
GAACTTGAAA AATCCATGGG CGAGGCGAAT GAAGCCTTAG ATTTAGCCAC TCAGCCGCCT
GCTGTGATCA TGATGGCGGG TTTGCAAGGT GCGGGTAAAA CCACCAGTGT GGCCAAACTG
GGTAAATTTT TACGCGAACG CCATAAAAAA TCGGTATTGG TGGTCAGTGC CGACGTTTAC
CGCCCTGCGG CGATCAAACA GCTTGAGACA TTAGCGCAAG AAGTCGCGGT GGAGTTTTTC
CCATCGGACG TTAGCCAAAA GCCAATCGAC ATTGCGAAAG CGGCGATTGC CCACGCTAAA
TTAAAGTTCA TCGATGTGGT GATCCTCGAT ACCGCGGGTC GTCTGCATGT CGACGAAGCC
ATGATGGACG AGATCAAAGG CTTACACGCT GCAGTCAAGC CTATCGAGAC CTTGTTCGTT
GTGGATGCTA TGACAGGTCA AGATGCGGCG AACACGGCTA AGGCGTTTAA CGAAGCTTTA
CCTCTGACAG GGGTTATCTT AACCAAAGTC GATGGTGATG CCCGCGGTGG TGCTGCGTTA
TCGATTCGCC ATATTACCGG CAAGCCGATT AAATTCCTCG GTGTCGGTGA AAAGACCGAT
GCGTTAGAAC CGTTCCATCC CGATCGTATT GCCTCGCGTA TTTTGGGTAT GGGCGATGTG
TTATCGCTGA TCGAAGAAGT TGAGCGCGGC GTCGATAAAG AAAAGGCCAT GAAACTGGCT
TCGAAAGTGA AGCAGGGTGG CAGTTTTGAT TTAGAAGATT TCCGTGAGCA ATTACAGCAA
ATGAAAAACA TGGGCGGCAT GATGAACATG CTGGAAAAAC TGCCCGGTGT GGGTCAATTG
CCCCCAGAAG CCTTAGCGCA AATCCAAGAC GGCAAGATGA CAGGCCAAAT GGAAGCCATC
ATTAATTCGA TGACGTCCAA AGAGCGTAAG AACCCTGATT TAATCAAGGG CTCACGCAAG
CGTCGTATTG CTGCGGGTTC TGGCACGCAA ATCCAAGACG TAAACCGTTT ATTGAAACAG
TTTACGCAAA TGCAAAAGAT GATGAAAAAA ATGTCTGCTA AGGGCGGCAT GCAAAAAATG
ATGCGCGGAA TGCGTGGCAT GATGCCGCCT GGAATGAAAT TTCCAGGCCG TTAA
 
Protein sequence
MFENLTDRLS RTLKNISGRG RLTEENVKET LREVRMALLE ADVALPVVRE FVNNVKERAV 
GQEVSKSLSP GQAFIKIVQS ELEKSMGEAN EALDLATQPP AVIMMAGLQG AGKTTSVAKL
GKFLRERHKK SVLVVSADVY RPAAIKQLET LAQEVAVEFF PSDVSQKPID IAKAAIAHAK
LKFIDVVILD TAGRLHVDEA MMDEIKGLHA AVKPIETLFV VDAMTGQDAA NTAKAFNEAL
PLTGVILTKV DGDARGGAAL SIRHITGKPI KFLGVGEKTD ALEPFHPDRI ASRILGMGDV
LSLIEEVERG VDKEKAMKLA SKVKQGGSFD LEDFREQLQQ MKNMGGMMNM LEKLPGVGQL
PPEALAQIQD GKMTGQMEAI INSMTSKERK NPDLIKGSRK RRIAAGSGTQ IQDVNRLLKQ
FTQMQKMMKK MSAKGGMQKM MRGMRGMMPP GMKFPGR