| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3102 |
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| Symbol | rimM |
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| ID | 7087880 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 3680231 |
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| End bp | 3680761 |
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| Gene Length | 531 bp |
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| Protein Length | 176 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 643461986 |
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| Product | 16S rRNA-processing protein RimM |
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| Protein accession | YP_002359010 |
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| Protein GI | 217974259 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
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| TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000126118 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.166795 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCAGTA ACCAACAGCC AGTCGTACTG GGGAAATTAG GCTCCTGTCA TGGCATTAAA
GGTTGGCTGA AAATCACCGC CTATACCGAT TCTGTTGAAG GTATCTTTGA CTACTCGCCT
TGGCTTATTA AAGAAAATGG TGAGTGGCGC GAAATAAAGG TCACCCAGTG GCGTTATCAA
GGCAAGGCCG TTGTTGCCTT ACTTGATGGC GTAGAAACAC GGGAGCAAGC GCAAATGCTC
ACAAATTGTG AGATTGCGAT TTTGCCGGAA CAGATGAACG ATTTGCCAGC AGATGAATTC
TACTGGCGTG ATCTCATCGG TTGCGAAGTG GTCAATACAA CTGGCTATAA CATGGGAATT
GTCGATCAGA TCGTGGAAAC AGGATCGAAC GACGTATTAC TCGTTAAAGC CAACGCTAAA
GATAGTTTCG GCAAAGTGGA ACGTATGATC CCCTTTGTCC CTGAGCAGTT CATCAAAACG
GTGGACCTGC AAGGTAAACA GATTTTAGTG GATTGGGATC CTGACTTCTA A
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| Protein sequence | MSSNQQPVVL GKLGSCHGIK GWLKITAYTD SVEGIFDYSP WLIKENGEWR EIKVTQWRYQ
GKAVVALLDG VETREQAQML TNCEIAILPE QMNDLPADEF YWRDLIGCEV VNTTGYNMGI
VDQIVETGSN DVLLVKANAK DSFGKVERMI PFVPEQFIKT VDLQGKQILV DWDPDF
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