Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_3077 |
Symbol | |
ID | 7088987 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 3649608 |
End bp | 3651305 |
Gene Length | 1698 bp |
Protein Length | 565 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643461961 |
Product | PepSY-associated TM helix domain protein |
Protein accession | YP_002358985 |
Protein GI | 217974234 |
COG category | [S] Function unknown |
COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.000516012 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAGAGA CATTTTTTAG AACCTTATCT TGGCTACATA CTTGGGCAGG CTTGCTCGTG TGCTGGGTGT TATTGTTGAT CTTTTTTGCG GGTAGCTTGA GCTATTTCCG CCATGAAATC AGCCTTTGGA ACGAACCCGA ATTACACCAA GGGGTTTATC AAGACTATCA AGCCGATACG CTCGCAAATC AGCTGGATAA AGGCCAAGAT TATATCGCAG CGCATTCGCC CGAATCGGCG CAGCGCTGGA TGATAGGTTT TCCGACCGAA CGTAAGCCCT TTCAAAGTGT GAGTTGGCAA TTGCCACCAG AAAAAGGTCA ACGTCGCGGC AAAACAGAAG AACATGTGGC CCTCGCCGAT GGCAGCGGCA TGATCTCAGA AGTGCGCGCA AGTCGTGGCG GCGATTTCTT CTATCGTCTG CACTTTGACT TGCATTATAT GTCCGCAATT ACGGCCCGAT ATATCGTCGG TATTTGCACT ATGTTTATGC TAATTGCCCT TATCAGCGGC ATAGTGATCC ACAAGCGGAT CTTCAAGGAT ATGTTCAGCT TTAGACGCGA CAAGGGCGCC CGCTCTTGGT TAGATGCACA CAATGTGAGC TCTGTCATCG CCCTGCCCTA CCATCTGATG ATCACTTATA CCGGGCTTAT CACCCTGATG TTGATCTATA TTCCGTGGAC GGTGGATACC GCCTATTCGG GTGACAGCCA AGCCTTTTTA AAAGAGCTGA ACCCCGCCAG ACAAACCGAG AAAGCCACGG GGATTAGCGC GCCACAGGTG CAGCTGAGTC AATTACTGCC GCAGGTGCAA GCCGCTTGGG GCGATGCGCC GATTAAGCAA GTGATAGTCT CATACCCTAA AGATCAAAAT AGCCAAGTGA CCTTTTACCA AAACACAGGT AAAGATGTGA CCGATGAGGC CAACATTTTG ATATTTAACG GGGTCAATGG TGAGCTTAAG TATGCCAGCC CGCATGAAGC CTCGGGAGCA TCCGCTACTT ACGACACTAT GATGTCGCTA CACACGGCGC GTTTTGCCGC CCCGCTATTA CGCATATTGT TCTTTTTCTG CGGCTTATTG GGTTGCGCTA TGGTCGCAAC AGGCACCTTG ATGTGGGCCA TTCGTCTACG TCAAAAACAA CAGAAAGCCA TAGAGAAAGG CGAGAAACCA AGCTTAGGAT TACGTCTCGT CGAAGGGTTA AACTTCATGT TTATCTTAGG ATTACCCTTA GGCGCTGTGA GCTTCTTTTA CGCAAATCGT CTGCTATCGA CAAGTTTTGC AGGCCGCTCC GAATGGGAAG TTCACAGCTT CTTTATCGCG TTAGCGGCAA TGGGAGTGTG GGCTTTCTTT GGCCGTTCAC GTCGCCAGTG GCAAGCTGCA TTGATAATCA CAGGCAGTTT GTGCTGTGCA CTGCCCGTGC TCAATGCCTT CACATCGCCG AGCAATCTCA TCGATAATAT CCAATCCCAT CAATGGCCTT TAGTCGGATT TGACGTGCTC GCCATTCTAC TTGGCGGCGC TATGCTATTT GCCAGCAAAA GATTAACTTT AATTGCTAAA GCCCCAGCCA AGCGCCCAGC AAGACCCGCA TTCAATGCGC CGAATACCAA AGCGAATAAA GCACGCCGCA GCGAGCCACA AACATCCCTA GCCAACGAAC TTACCTCGCC GTCTTCATTG GAGGAAGCCA AATCATGA
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Protein sequence | MKETFFRTLS WLHTWAGLLV CWVLLLIFFA GSLSYFRHEI SLWNEPELHQ GVYQDYQADT LANQLDKGQD YIAAHSPESA QRWMIGFPTE RKPFQSVSWQ LPPEKGQRRG KTEEHVALAD GSGMISEVRA SRGGDFFYRL HFDLHYMSAI TARYIVGICT MFMLIALISG IVIHKRIFKD MFSFRRDKGA RSWLDAHNVS SVIALPYHLM ITYTGLITLM LIYIPWTVDT AYSGDSQAFL KELNPARQTE KATGISAPQV QLSQLLPQVQ AAWGDAPIKQ VIVSYPKDQN SQVTFYQNTG KDVTDEANIL IFNGVNGELK YASPHEASGA SATYDTMMSL HTARFAAPLL RILFFFCGLL GCAMVATGTL MWAIRLRQKQ QKAIEKGEKP SLGLRLVEGL NFMFILGLPL GAVSFFYANR LLSTSFAGRS EWEVHSFFIA LAAMGVWAFF GRSRRQWQAA LIITGSLCCA LPVLNAFTSP SNLIDNIQSH QWPLVGFDVL AILLGGAMLF ASKRLTLIAK APAKRPARPA FNAPNTKANK ARRSEPQTSL ANELTSPSSL EEAKS
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